DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Acadvl and Acad11

DIOPT Version :10

Sequence 1:NP_611409.2 Gene:Acadvl / 37217 FlyBaseID:FBgn0034432 Length:627 Species:Drosophila melanogaster
Sequence 2:NP_001101651.1 Gene:Acad11 / 315973 RGDID:1306270 Length:779 Species:Rattus norvegicus


Alignment Length:489 Identity:117/489 - (23%)
Similarity:199/489 - (40%) Gaps:75/489 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 TRYLAGNAS--------------------LCRQIATHSP-------KLGAESNRSKEKASENESF 46
            :|||.||.|                    |.|:..:..|       :|.|:|.|.:|..:..:.|
  Rat   324 SRYLMGNNSSEDSFLTANTVQPLAETGLQLSRRTLSTVPPQADAKSRLFAQSRRGQEVLTRVKQF 388

  Fly    47 MANIFRGSLVSSQVFPYPDVLTAEQKELTNSLIDPFERFFSDVNDAARNDANSKIDDTTSTALWE 111
            |         ...|||       .:||:.       |.:..:.|.|.:.:....|:.....|..|
  Rat   389 M---------KQHVFP-------AEKEVA-------EYYAQNGNSAEKWEHPLVIEKLKEMAKAE 430

  Fly   112 LGAFGIQVPSEFGGLGLNNTQYGRLCAIVG----VNDLGLGITIGAHQSIGFKGILLYGTPEQKE 172
             |.:.:.:|:.   .||:...|..:....|    ..|:   ....|..:...:.:.|||:.:||:
  Rat   431 -GLWNLFLPAV---SGLSQVDYALIAEETGKCFFAPDV---FNCQAPDTGNMEVLHLYGSEQQKQ 488

  Fly   173 KYLPKVAAEQVYAAFALTEPS-SGSDAGSIRCRAVKSADGKHYVLNGSKIWISNGG--IAEIMTV 234
            ::|..:....:.:.|.:|||: |.|||.::.|...:  ||..|:::|.|.|.|..|  ..:|..|
  Rat   489 QWLEPLLRGDITSVFCMTEPNVSSSDATNMECSIQR--DGGSYIVHGKKWWSSGAGNPKCKIAVV 551

  Fly   235 FAQTEQVDPKTGEKKDKVTAFI-VERSFGGVTNGPPEKKMGIKAS---NTAEVYFEDVKIPIENV 295
            ..:||  .|..  .:.||.:.| |.....||....|....|...:   ...||:|..|::|..|:
  Rat   552 LGRTE--SPSV--SRHKVHSMILVPMDTPGVELIRPLSVFGYMDNVHGGHWEVHFNHVRVPASNL 612

  Fly   296 LGKEGDGFKVAMNILNNGRFGMGATLSGTMKKCIEQATEHANNRVQFGQKLKNYGSIQEKLAQMN 360
            :..||.||:::...|..||........|..::.::...:.|..|..||:||..:..:...:|:..
  Rat   613 ILGEGRGFEISQGRLGPGRIHHCMRSVGLAERILQIMCDRAVQREAFGKKLYEHEVVAHWIAKSR 677

  Fly   361 ILQYATESMAFTISQNMDA-GSKDYHLEAAISKIYASESAWYVCDEAIQILGGMGYMVDNGLERV 424
            |.......:....:.::|. ||.....|.|:.|:.|.::...:.|.|||:.||.|...|..|..:
  Rat   678 IAIEEIRLLTLKAAHSIDTLGSAAARKEIAMIKVAAPKAVCKIADRAIQVHGGAGVSQDYPLANM 742

  Fly   425 LRDLRIFRIFEGTNDILRLFIALTGIQYAGSHLK 458
            ...:|..|:.:|.:::....||...:|.....||
  Rat   743 YAIIRTLRLADGPDEVHLSAIAKMELQDQARQLK 776

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AcadvlNP_611409.2 VLCAD 45..454 CDD:173850 101/420 (24%)
Acad11NP_001101651.1 PLN02876 10..769 CDD:215473 114/480 (24%)

Return to query results.
Submit another query.