DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Acadvl and Acad9

DIOPT Version :10

Sequence 1:NP_611409.2 Gene:Acadvl / 37217 FlyBaseID:FBgn0034432 Length:627 Species:Drosophila melanogaster
Sequence 2:NP_861433.2 Gene:Acad9 / 294973 RGDID:727973 Length:625 Species:Rattus norvegicus


Alignment Length:623 Identity:283/623 - (45%)
Similarity:386/623 - (61%) Gaps:25/623 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 AGNASLCRQIATHSPKLGAESNRSKEKASENESFMANIFRGSLVSSQVFPYPDVLTAEQKELTNS 77
            |..||...::.|       |..|:...:.::.||...:|.|.:....|||:|:|...|..|: |.
  Rat    17 AARASRVLRVFT-------ERRRTLHTSLQSCSFAKELFLGHIQQKGVFPFPEVSQEELSEI-NQ 73

  Fly    78 LIDPFERFFSDVNDAARNDANSKIDDTTSTALWELGAFGIQVPSEFGGLGLNNTQYGRLCAIVGV 142
            .:.|.|:||::..|:.:.|...||...|...|..||.||||||.|:|||||:||.|.||..|:.:
  Rat    74 FVGPLEKFFNEEVDSRKIDQEGKIPADTLAKLKSLGLFGIQVPEEYGGLGLSNTMYARLGEIISM 138

  Fly   143 NDLGLGITIGAHQSIGFKGILLYGTPEQKEKYLPKVAAEQVYAAFALTEPSSGSDAGSIRCRAVK 207
             |..:.:|:.|||:||.|||:|.|..|||.|||||:::.:..|||.||||:|||||.||:.||..
  Rat   139 -DASITVTLAAHQAIGLKGIILVGNEEQKAKYLPKLSSGEHIAAFCLTEPASGSDAASIQTRATL 202

  Fly   208 SADGKHYVLNGSKIWISNGGIAEIMTVFAQTEQVDPKTGEKKDKVTAFIVERSFGGVTNGPPEKK 272
            |.|.|::||||||:||:|||:|.|.||||:||.|| ..|..|||:|||||||.|||:|||.||.|
  Rat   203 SEDKKYFVLNGSKVWITNGGLANIFTVFAKTEVVD-SDGSIKDKMTAFIVERDFGGITNGKPEDK 266

  Fly   273 MGIKASNTAEVYFEDVKIPIENVLGKEGDGFKVAMNILNNGRFGMGATLSGTMKKCIEQATEHAN 337
            :||:.|||.||:||:.::|:|||||:.|.||||||||||:|||.||:.::|.:||.|||..|:|.
  Rat   267 LGIRGSNTCEVHFENTRVPVENVLGEVGGGFKVAMNILNSGRFSMGSAVAGMLKKLIEQTAEYAC 331

  Fly   338 NRVQFGQKLKNYGSIQEKLAQMNILQYATESMAFTISQNMD-AGSKDYHLEAAISKIYASESAWY 401
            .|.||.:.|..:|.||||.|.|....|..||||:..|..:| .|..|..:|||:.|:::||:||.
  Rat   332 TRKQFNRNLSEFGLIQEKFALMAQKAYVMESMAYLTSGMLDQPGFPDCSIEAAMVKVFSSEAAWQ 396

  Fly   402 VCDEAIQILGGMGYMVDNGLERVLRDLRIFRIFEGTNDILRLFIALTGIQYAG----SHLKELQR 462
            ...||:|||||.|||.|...||:|||.||..||||||:||||||||||:|:||    |.:|||: 
  Rat   397 CVSEALQILGGSGYMKDYPYERMLRDARILLIFEGTNEILRLFIALTGLQHAGRILTSRIKELK- 460

  Fly   463 AFKNPSANLGLIFKEASRR----AASTVGLGGTDLSGHVVGELLPYAKKTAHCIDLFGQSVEELL 523
                 |.|:..:.:...|:    ...||.||.:.....|...|...|.|....:..||::||.||
  Rat   461 -----SGNVTTVMETIGRKLRDSLGRTVDLGLSSNIAVVHPSLGDSANKLEENVHYFGRTVETLL 520

  Fly   524 LRYNKNIVNEQILLTRLANAAIDIYAMVVTQSRSSRAVNLNLPTAQHELNMTKALTIQASDRVIK 588
            ||:.|.||.||::|.|:||..|::|.|....||:||::.:.|....||:.:.....::|..:.:.
  Rat   521 LRFGKTIVEEQLVLKRVANILINLYGMTAVLSRASRSIRIGLKNHDHEILLANMFCVEAYFQNLF 585

  Fly   589 NLQAATSSHHRSLNEKISTIAKTTLENGGVTTTGILDQ 626
            :|.........:|:|:|..:::..||.........||:
  Rat   586 SLSQLDKYAPENLDEQIKKVSQQILEKRAYICAHPLDR 623

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AcadvlNP_611409.2 VLCAD 45..454 CDD:173850 224/409 (55%)
Acad9NP_861433.2 VLCAD 42..449 CDD:173850 224/409 (55%)

Return to query results.
Submit another query.