DRSC/TRiP Functional Genomics Resources

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Protein Alignment Acadvl and Acox2

DIOPT Version :10

Sequence 1:NP_611409.2 Gene:Acadvl / 37217 FlyBaseID:FBgn0034432 Length:627 Species:Drosophila melanogaster
Sequence 2:NP_665713.2 Gene:Acox2 / 252898 RGDID:628684 Length:681 Species:Rattus norvegicus


Alignment Length:495 Identity:109/495 - (22%)
Similarity:177/495 - (35%) Gaps:107/495 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 HSPKLGAESNRSKEKASENESFMANIFRGSLVSSQVFPYPDVLTAEQKELTNSLIDP---FERFF 86
            |||....|.             :.||..|.|.::       ||..:.:.:..|  ||   .::.:
  Rat    27 HSPSFSVER-------------LTNILDGGLPNT-------VLRRKVESIIQS--DPVFNLKKLY 69

  Fly    87 SDVNDAARNDANSKIDDTTSTALWELGAFGIQVPSEFG--GLGLNNTQYGRLCAIVGVNDLGL-G 148
            ....:....||..|.......| |.||.      ||.|  .:..|....|.:       :|.| |
  Rat    70 FMTREELYEDAIQKRFHLEKLA-WSLGW------SEDGPERIYANRVLDGNV-------NLSLHG 120

  Fly   149 ITIGAHQSIGFKGILLYGTPEQKEKYLPKVAAEQVYAAFALTEPSSGSDAGSIRCRAVKSADGKH 213
            :.:.|.:|:        |:.||..|:.......|:...:|.||...|:....:...|......:.
  Rat   121 VAMNAIRSL--------GSDEQIAKWGQLCKNFQIITTYAQTELGHGTYLQGLETEATYDEARQE 177

  Fly   214 YVLN-----GSKIWISN-GGIAEIMTVFAQTEQVDPKTGEKKDKVTAFIVE-RS------FGGVT 265
            :|::     .:|.|..: |.......|.||...:..:.|     :.||||. ||      ..|:|
  Rat   178 FVIHSPTMTSTKWWPGDLGWSVTHAVVLAQLTCLGVRHG-----MHAFIVPIRSLEDHTPLPGIT 237

  Fly   266 NGPPEKKMGIKASNTAEVYFEDVKIPIENVLGKEG----DGFKVAMNILNNGRFGMGAT------ 320
            .|....|||::..:...:....|::|.||:|.:..    ||....:....:...||..|      
  Rat   238 VGDIGPKMGLEHIDNGFLQLNHVRVPRENMLSRFAEVLPDGTYQRLGTPQSNYLGMLVTRVQLLC 302

  Fly   321 ---LSGTMKKCIEQATEHANNRVQF-------GQKLKNYGSIQEKLAQMNILQYATESMAFTISQ 375
               |....|.|| .||.::..|.|.       ..|:..|.:.|:||.....:.||....|.::|:
  Rat   303 KGILPSLQKACI-IATRYSVIRHQSRLRPSDPEAKILEYQTQQQKLLPQLAVSYAFHFTATSLSE 366

  Fly   376 NMDAG-----SKDYHLEAAISKIYASESAWYV--CDEAIQI----LGGMGYMVDNGLERVLRDLR 429
            ...:.     .:|:.|...:..:.....|.:.  |.:..:|    .||.||...:||..::....
  Rat   367 FFHSSYSAILKRDFSLLPELHALSTGMKATFADFCAQGAEICRRACGGHGYSKLSGLPTLVARAT 431

  Fly   430 IFRIFEGTNDILRLFIALTGIQYAGSHLKELQRAFKNPSA 469
            ....:||.|.:|.|       |.|...:|...:|..:|.|
  Rat   432 ASCTYEGENTVLYL-------QVARFLMKSYLQAQASPGA 464

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AcadvlNP_611409.2 VLCAD 45..454 CDD:173850 100/458 (22%)
Acox2NP_665713.2 AXO 20..655 CDD:173839 109/495 (22%)
Microbody targeting signal. /evidence=ECO:0000255 679..681
Blue background indicates that the domain is not in the aligned region.

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