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Protein Alignment CG7461 and Ivd

DIOPT Version :9

Sequence 1:	NP_001286611.1	Gene:	CG7461 / 37217	FlyBaseID:	FBgn0034432	Length:	627	Species:	Drosophila melanogaster
Sequence 2:	NP_036724.1	Gene:	Ivd / 24513	RGDID:	2936	Length:	424	Species:	Rattus norvegicus

Alignment Length:	388	Identity:	125/388 - (32%)
Similarity:	201/388 - (51%)	Gaps:	24/388 - (6%)

- Green bases have known domain annotations that are detailed below.

  Fly    67 LTAEQKELTNSLIDPFERFFSDVNDAARNDANSKIDDTTSTALWE----LGAFGIQVPSEFGGLG 127
            |..|||:|.:::    .:|..:.......:.:...|.......|:    ||..||..|.::||.|
  Rat    43 LNEEQKQLRHTI----SKFVQENLAPKAQEIDQSNDFKNLREFWKQLGSLGVLGITAPVQYGGSG 103

  Fly   128 LNNTQYGRLCAIVGVNDLGLGITIGAHQSIGFKGILLYGTPEQKEKYLPKVAAEQVYAAFALTEP 192
            |...::..:...:......:|::.|||.::....|:..|...||||||||:.:.:...|.|::||
  Rat   104 LGYLEHVLVMEEISRASAAVGLSYGAHSNLCINQIVRNGNEAQKEKYLPKLISGEFIGALAMSEP 168

  Fly   193 SSGSDAGSIRCRAVKSADGKHYVLNGSKIWISNGGIAEIMTVFAQTE--QVDPKTGEKKDKVTAF 255
            ::|||..|:|.:|.|..|  ||||||:|.||:||..|:::.|:|:|:  .|....|     :|||
  Rat   169 NAGSDVVSMRLKAEKKGD--HYVLNGNKFWITNGPDADVLVVYAKTDLTAVPASRG-----ITAF 226

  Fly   256 IVERSFGGVTNGPPEKKMGIKASNTAEVYFEDVKIPIENVLGKEGDGFKVAMNILNNGRFGMGAT 320
            |||:...|.:......|:|::.|||.|:.|||.|:|..|:|.:|..|..|.|:.|:..|..:...
  Rat   227 IVEKDMPGFSTSKKLDKLGMRGSNTCELVFEDCKVPAANILSQESKGVYVLMSGLDLERLVLAGG 291

  Fly   321 LSGTMKKCIEQATEHANNRVQFGQKLKNYGSIQEKLAQMNILQYATESMAFTISQNMDAGSKDYH 385
            ..|.|:..::....:.:.|..||||:..:..:|.|:|.|.....|.....:.:::..|.|    |
  Rat   292 PLGIMQAVLDHTIPYLHVREAFGQKIGQFQLMQGKMADMYTRLMACRQYVYNVARACDEG----H 352

  Fly   386 LEA---AISKIYASESAWYVCDEAIQILGGMGYMVDNGLERVLRDLRIFRIFEGTNDILRLFI 445
            :.|   |...:|.:|.|..|..:.||.|||.||:.|..:.|.|||.:::.|..||:::.||.|
  Rat   353 ITAKDCAGVILYTAECATQVALDGIQCLGGNGYINDFPMGRFLRDAKLYEIGGGTSEVRRLVI 415

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.