DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Acadvl and acdh-9

DIOPT Version :10

Sequence 1:NP_611409.2 Gene:Acadvl / 37217 FlyBaseID:FBgn0034432 Length:627 Species:Drosophila melanogaster
Sequence 2:NP_493832.1 Gene:acdh-9 / 173466 WormBaseID:WBGene00017874 Length:409 Species:Caenorhabditis elegans


Alignment Length:383 Identity:122/383 - (31%)
Similarity:194/383 - (50%) Gaps:32/383 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    83 ERFFSDVNDAARNDANSKIDDTTSTALW---------------ELGAFGIQVPSEFGGLGLNNTQ 132
            ||...||.:||...|..::  ....|.|               |:|...|....:.||.||:   
 Worm    28 ERDVEDVLEAAHQFAKKEM--YPKMADWDKQGELPMDVLRKAGEMGFGAIYCSGDHGGSGLS--- 87

  Fly   133 YGRLCAIVGVNDLGLG-ITIGAHQSI-GFKGILL--YGTPEQKEKYLPKVAAEQVYAAFALTEPS 193
              ||.|.|....|.:| ::..|:.|| .....:|  ||..:.||..||.:|..:...::.||||.
 Worm    88 --RLHASVIFEQLSMGCVSTAAYISIHNMCAWMLDTYGPEKLKEDLLPDMAVFKKLGSYCLTEPD 150

  Fly   194 SGSDAGSIRCRAVKSADGKHYVLNGSKIWISNGGIAEIMTVFAQTEQVDPKTGEKKDKVTAFIVE 258
            :||||.|||..|.|..|  :||:||||.:||..|.:.  ..|....|.....|.|  .:...::|
 Worm   151 AGSDAASIRTTATKKGD--YYVVNGSKAFISGAGTSN--NYFVMMRQDGAAPGAK--GIFCLMIE 209

  Fly   259 RSFGGVTNGPPEKKMGIKASNTAEVYFEDVKIPIENVLGKEGDGFKVAMNILNNGRFGMGATLSG 323
            ....|.:.|..|.|:|..:..|..:.|||.|:||.|.:||:|.||.:||..||.||..:.:...|
 Worm   210 DGTEGFSYGKKEDKLGWNSQPTRILTFEDCKVPITNQIGKDGFGFNIAMAGLNGGRINIASCSLG 274

  Fly   324 TMKKCIEQATEHANNRVQFGQKLKNYGSIQEKLAQMNILQYATESMAFTISQNMDAGSKDYHLEA 388
            ..::.::.|.||...|.|||:.|.::...|.|||::....|.:..:....::.:|....:.....
 Worm   275 AAQRSMDLAIEHLKYRKQFGKSLADFQYNQFKLAELATKLYTSRLIVRNAAEQLDNDDPEKVALC 339

  Fly   389 AISKIYASESAWYVCDEAIQILGGMGYMVDNGLERVLRDLRIFRIFEGTNDILRLFIA 446
            |::|::|:::.:.|.:.|:|:.||.|::.|..:::.|||:|:.:|.||||:::||.|:
 Worm   340 AMAKLHATDNCFDVVNGALQMFGGYGFLKDYPVQQYLRDIRVHQILEGTNEMMRLLIS 397

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AcadvlNP_611409.2 VLCAD 45..454 CDD:173850 122/383 (32%)
acdh-9NP_493832.1 IBD 27..403 CDD:173851 122/383 (32%)

Return to query results.
Submit another query.