DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7461 and acox-1.2

DIOPT Version :9

Sequence 1:NP_001286611.1 Gene:CG7461 / 37217 FlyBaseID:FBgn0034432 Length:627 Species:Drosophila melanogaster
Sequence 2:NP_493262.2 Gene:acox-1.2 / 173163 WormBaseID:WBGene00008565 Length:661 Species:Caenorhabditis elegans


Alignment Length:525 Identity:108/525 - (20%)
Similarity:190/525 - (36%) Gaps:114/525 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   148 GITIGAHQSIGFKGILLYGTPEQKEKYLPKVAAEQVYAAFALTEPSSGSDAGSIRCRAVKSADGK 212
            |.....|.::....:....:.||:||:|.:....::...:|.||...||:..::...||.....:
 Worm   108 GHPFALHDALFIPTLQSQASDEQQEKWLERARRREIIGCYAQTELGHGSNLRNLETTAVYDIASQ 172

  Fly   213 HYVLN-----GSKIWISNGG--------IAEIMTV-------FAQTEQVDPKTGEKKDKVTAFIV 257
            .:||:     ..|.|....|        :||::..       |...:..|.||            
 Worm   173 EFVLHTPTTTALKWWPGALGKSCNYALVVAELIIKRNNYGPHFFMVQLRDEKT------------ 225

  Fly   258 ERSFGGVTNGPPEKKMGIKASNTAEVYFEDVKIPIENVLGK----EGDGFKVAMNILNNGRFGMG 318
            .....|||.|....||...|::...:...::::|..|:|.:    |.||..|.......|..||.
 Worm   226 HIPLKGVTVGDIGPKMNFNAADNGYLGLNNLRVPRTNLLMRHCKVEADGTYVKPPHAKIGYSGMV 290

  Fly   319 ATLSGTMKKCIEQA--TEHANNRVQFGQKLKNYGSIQEKLAQMNILQYATE------SMA----- 370
            ...|   :..:||.  ..||.........::..|.:.:|..::.:|.|.|:      |:|     
 Worm   291 KIRS---QMAMEQGLFLAHALTIAARYSAVRRQGHLDDKQVEVKVLDYQTQQHRLFPSLARAYAF 352

  Fly   371 -FT--------------ISQNMDAGSKDYH-LEAAISKIYASESAWYVCDEAIQILGGMGYMVDN 419
             ||              :.....:|..|.| |.:.:..:.|.|:...: ::|....||.||.:.:
 Worm   353 IFTGFETIHLYSQLLKDVDMGNTSGMADLHALTSGLKSVVAHETGEGI-EQARMACGGHGYSMAS 416

  Fly   420 GLERVLRDLRIFR-IFEGTNDILRLFIALTGIQYAGSHLKELQRAFKNPSANLGLIFKEASRRAA 483
            .:. |:..:.|.. .:||.|.::.|       |.|...:|.::......:..||.:   ||..|.
 Worm   417 YIS-VVYGIAIGGCTYEGENMVMLL-------QLARYLVKSVELIKAGKAKKLGPV---ASYLAD 470

  Fly   484 STVGLGGTDLSGHV-VGELLPYA---KKTAHCIDLFGQSVEELLLRYNKNIVNEQILLTRLANAA 544
            .:.....|.|:|:| :.|.:...   |.|...:.|. :|.|...:.:||:.|.    |||.:...
 Worm   471 KSDETDLTSLNGYVKMFENMARRQAWKATEKFLKLM-ESGESREVAWNKSAVE----LTRASRLH 530

  Fly   545 IDIYAMVVTQSRSSRAVNLNLPTAQHELNMTKALTIQASDRVIKNLQAATSSHHRSLNEKISTIA 609
            ..::.:.....|.||                      ..|..:|  :..|...|..:|.::..:|
 Worm   531 TRLFIIEAFMRRVSR----------------------IEDIPVK--EVLTDLLHLHVNYELLDVA 571

  Fly   610 KTTLE 614
            ...||
 Worm   572 TYALE 576

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7461NP_001286611.1 VLCAD 45..454 CDD:173850 74/359 (21%)
CaiA 67..446 CDD:224871 73/351 (21%)
acox-1.2NP_493262.2 ACAD 12..635 CDD:299127 108/525 (21%)
PLN02443 14..658 CDD:178062 108/525 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1960
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.