DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tab2 and tab3

DIOPT Version :9

Sequence 1:NP_001246417.1 Gene:Tab2 / 37216 FlyBaseID:FBgn0086358 Length:831 Species:Drosophila melanogaster
Sequence 2:NP_001038570.1 Gene:tab3 / 566547 ZFINID:ZDB-GENE-060503-408 Length:573 Species:Danio rerio


Alignment Length:810 Identity:143/810 - (17%)
Similarity:226/810 - (27%) Gaps:371/810 - (45%)


- Green bases have known domain annotations that are detailed below.


  Fly   101 LFHEMKQEFPTIPDAIVTQCVNENCHQRENCIQMLRKELALHPIPVQSYPAKVLQQQQQQHHQNR 165
            :..:::|.||.||:.:|:|.:.:|.:..:.|..:|.:|...:.......|..:        |.||
Zfish    13 ILQDLRQRFPEIPETVVSQYLLQNNNNADLCYHLLAQESNRYLYEEYHSPDDL--------HLNR 69

  Fly   166 QAKPPTPLKPSRIAPPQPEAVLSNGVATPPGVGSPHPDTQ---PRPRPTTLNLQRQFSTQLQQKI 227
            ...    |:.| :..|.|:.|.:|    |.|....|..:.   ..||       ..||..|.   
Zfish    70 NHM----LRIS-VGYPVPDGVKNN----PGGRALVHSSSDGHIEHPR-------SGFSEPLS--- 115

  Fly   228 MQRQQRQQRDHQPAQLTPTSLSKPL------RRAPPLPPPPKPKPGSFSNDSSCLTSPMSSSESE 286
                       .||.:.|:....|.      |...|.|||                         
Zfish   116 -----------APATMAPSPGYNPFFKTDQSRSNIPTPPP------------------------- 144

  Fly   287 LSLNAVPLSSPTSAAATAAAASAAIASTQQQPSPVRHRSVITLQPEPPYARDFRSIDFPPTTACT 351
                ::|..|||....:.......:..:|..||          .|:        ::..||.|.||
Zfish   145 ----SIPGMSPTYHPVSRYMTPITVTLSQNMPS----------APQ--------ALQIPPGTYCT 187

  Fly   352 P-----RLPSPSSAASP----------------SAPGGRKSFTSLNLTLRQPTGSAQSAIDITAG 395
            .     ..||||.:..|                :.|..:..::|....::||   .|..:.|:..
Zfish   188 SGNTVYMRPSPSQSPQPTPWSTSGTSMYQQSPYATPTYQSPYSSPQHQVQQP---PQVFLPISPP 249

  Fly   396 PAPSGQGSGITY-----SSVSFDARRGTQKNFQLTVTDEGSVFSAGSVRPRTLYATPCEPVTSVP 455
            ..|     |::|     |...|.:.:|..|| |:.:|.||.       |||              
Zfish   250 TLP-----GLSYQQTPVSQRPFISSKGPMKN-QIEITLEGQ-------RPR-------------- 287

  Fly   456 ANQQPPPPAAVVADGLGDADMTSDVFPYPTQEQNHIVASNYSNNHAVSDNNNIGISNSTDSSPTM 520
                                                                   |||...:|..
Zfish   288 -------------------------------------------------------SNSPVHTPQG 297

  Fly   521 PLYEGVMEECDREARAATIERQKQRRDKLANALRDNKKRLLVLEQEINILTEPVPVGESERLDRD 585
            .||                                             :.|.|.|...|..:.  
Zfish   298 ALY---------------------------------------------MATSPSPSSPSRAIS-- 315

  Fly   586 IKQLTEDCNRLLDCLNEPQANGPGPAANPTNRQHLLPASNASQQQPQQQPQPF------PRQRQS 644
                              .|..||.:.:.....|...|.......||..|..|      |||.|.
Zfish   316 ------------------MAGPPGASIHQGMYAHQAVARPRPTSSPQPAPSAFIKIKVSPRQVQG 362

  Fly   645 A-------------------RVQAPPSSLRLHSVPAAPISQPVQDFGQHHSS-----APTSACLT 685
            :                   |..|||..|.:.::|.: |:..:....:..||     |.|.|.|.
Zfish   363 SSNSPPVETESLLNIVDQGERHGAPPPILPISALPGS-IANQINCMPRRSSSGSDDYAYTQALLL 426

  Fly   686 PQMQSQQQLLQLQQEPPPTYAQYYQFQQYLQQQRQQQLQQQMQQQQ--QLQHQMQQQQQ----PQ 744
            .|....::|::               :..|::|:..||:.::.:.:  .||.:.::...    |:
Zfish   427 HQRARMERLMK---------------ELMLERQKLDQLKAEVNEMEFDALQRRFRRVNSTSLIPR 476

  Fly   745 PQQEEEFLSDS-----DVD---EEEETLDS----------------------------------- 766
            |::..:..|.:     |:|   :|.:.|.|                                   
Zfish   477 PEEMTKIRSQNRQLQIDIDCTLKETDLLQSRGKFDLRTMNNFYDNIQPGPVVPPRAKPTAVQRDE 541

  Fly   767 ------WACNMCTFRNHPQLNICEACENVR 790
                  |.|..|||.|||.|:.||.||..|
Zfish   542 DFEGAQWNCESCTFLNHPALHRCEQCEMPR 571

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tab2NP_001246417.1 CUE_TAB2_TAB3 98..138 CDD:270545 10/36 (28%)
NYD-SP28 528..>602 CDD:291438 4/73 (5%)
ZnF_RBZ 765..789 CDD:197784 14/64 (22%)
RanBP2-type Zn finger 767..786 CDD:275376 11/18 (61%)
tab3NP_001038570.1 CUE_TAB2_TAB3 10..51 CDD:270545 10/37 (27%)
ZnF_RBZ 547..570 CDD:197784 13/22 (59%)
RanBP2-type Zn finger 548..567 CDD:275376 11/18 (61%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 80 1.000 Domainoid score I8541
eggNOG 1 0.900 - - E1_28IZ6
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 85 1.000 Inparanoid score I5150
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.950

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