DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tab2 and Tab2

DIOPT Version :9

Sequence 1:NP_001246417.1 Gene:Tab2 / 37216 FlyBaseID:FBgn0086358 Length:831 Species:Drosophila melanogaster
Sequence 2:XP_038966843.1 Gene:Tab2 / 308267 RGDID:1309527 Length:697 Species:Rattus norvegicus


Alignment Length:606 Identity:126/606 - (20%)
Similarity:202/606 - (33%) Gaps:195/606 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   101 LFHEMKQEFPTIPDAIVTQCVNENCHQRENCIQMLRKE---------------------LALHPI 144
            :.|:::|:||.:|:.:|::|:.:|.:..:.|..:|.:|                     |..|..
  Rat    12 VLHDLRQKFPEVPEVVVSRCMLQNNNNLDACCAVLSQESTRYLYGEGDLNFSDESGISGLRNHMT 76

  Fly   145 PVQSYPAKVLQQQQQQHH----------------------QNRQAKPPTPLKPSRIAPPQ-PEAV 186
            .:.    ..||.|...||                      |..|:......:..:.||.| |:..
  Rat    77 SLN----LDLQSQNVYHHGREGSRVNGSRTLTHSVSDGQLQGGQSNNELFQQEPQTAPAQVPQGF 137

  Fly   187 LSNGVATPPGV--GSPH----------------------------PDTQP-RPRPTTLNLQ---- 216
            ...|:.:..|.  .:||                            |:.|. |..||:|::.    
  Rat   138 NVFGMPSTSGASNSTPHLGFHLGSKGTSNLSQQTPRFNPIMVTLAPNIQTGRSTPTSLHIHGVPP 202

  Fly   217 -------------RQFSTQLQQKIMQRQQRQ-----------QRDHQPAQLTPTSLSKPLRRAPP 257
                         |.:.|.......|.||..           |:.:||:|..|.: :.|  .:.|
  Rat   203 PVLNSPQGNSIYIRPYITTPSGAARQTQQHSGWVSQFNPVNPQQAYQPSQPGPWT-TYP--ASNP 264

  Fly   258 LPPPPKPKPGSFSNDSSCLTSPMSSSESELSLNAVPLSSPTSAAATAAAASAAIASTQ---QQPS 319
            ||.....:|....:.:|.:..|:||.           ::|......::|:|.:.|.:|   |..|
  Rat   265 LPHTSTQQPNQQGHQTSHVYMPISSP-----------TTPQPPTVHSSASSQSSAHSQYNIQNIS 318

  Fly   320 PVRHRSVITLQPEPPYARDFRSI-DFPPTTACTPRL----------PSPSSAASP---------S 364
            ....::.|.::.|||.......: ...|.||.|..|          |:...||||         |
  Rat   319 TGPRKNQIEIKLEPPQRNSSSKLRSSGPRTASTSSLVNSQTLNRNQPTVYIAASPPSTDEMISRS 383

  Fly   365 APGGRKSFTSLNLTL-------RQP-----TGSAQSAI------DITAGPA------PSGQ--GS 403
            .|   |.:.|.|.:.       .||     |.|..||.      .::.|||      |..:  |.
  Rat   384 QP---KVYISANASTGDEQGMRNQPTLFISTNSGASAASRNMSGQVSMGPAFIHHHPPKSRVLGG 445

  Fly   404 GITYSSVSFDARRGTQKNFQLTVT-DEGSVFSAGSVRP----RTLYATPCEPVTSVPANQQPPPP 463
            ....|......:..|:..|::||: ::....|.|.|.|    ..|...|...|.:........|.
  Rat   446 NSAASPRVVVTQPNTKYTFKITVSPNKPPAVSPGVVSPTFELTNLLNHPDHYVETETIQHLTDPT 510

  Fly   464 AAVVADGLGDA---DMTSDVFPYPTQEQNHIVASNYSNNHAVSDNNNIG------ISNSTD-SSP 518
            .|.| |.:.:|   .|.||...| |||...|..|    ..||:....:.      :::|.| ..|
  Rat   511 LAHV-DRVSEARKLSMGSDDAAY-TQESTTIKFS----PSAVTQKTTVKVFGDGIVTSSVDIFEP 569

  Fly   519 TMPLYEGVMEECDREARAATI 539
            :.| :.|.......||...|:
  Rat   570 SSP-FSGDQPPLAHEALCFTV 589

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tab2NP_001246417.1 CUE_TAB2_TAB3 98..138 CDD:270545 10/36 (28%)
NYD-SP28 528..>602 CDD:291438 3/12 (25%)
ZnF_RBZ 765..789 CDD:197784
RanBP2-type Zn finger 767..786 CDD:275376
Tab2XP_038966843.1 CUE_TAB2_TAB3 9..50 CDD:270545 11/58 (19%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 80 1.000 Domainoid score I8387
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 85 1.000 Inparanoid score I5071
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.050

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