DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tab2 and tab2

DIOPT Version :9

Sequence 1:NP_001246417.1 Gene:Tab2 / 37216 FlyBaseID:FBgn0086358 Length:831 Species:Drosophila melanogaster
Sequence 2:NP_001090763.1 Gene:tab2 / 100037849 XenbaseID:XB-GENE-975095 Length:690 Species:Xenopus tropicalis


Alignment Length:871 Identity:173/871 - (19%)
Similarity:262/871 - (30%) Gaps:375/871 - (43%)


- Green bases have known domain annotations that are detailed below.


  Fly   101 LFHEMKQEFPTIPDAIVTQCVNENCHQRENCIQMLRK----------ELALHPIP----VQSYPA 151
            :.|.::|:||.:|:.:|::|:.:|.:..:.|..:|.:          ||:|...|    ::::..
 Frog    12 VLHNLRQKFPEVPEVVVSRCMQQNNNNLDACCAVLSQESTKYLYGEGELSLSDDPRIASLRNHMT 76

  Fly   152 KVLQQQQQQH---------HQNRQAKPPT-PLKPSRIAPPQPEAVLSNGVATPPGVGSPHPDTQP 206
            .:....|.|:         ..|..::..| .:....:          :||.:...:..|.|.|.|
 Frog    77 SLNLDLQSQNVYLDGRDGTRMNGNSRTLTHSISDGHL----------HGVQSSNELYQPEPQTAP 131

  Fly   207 RPRPTTLNL------------QRQFSTQLQQKIMQRQQRQQ---------RDHQPAQLTPTSLSK 250
            ...|.:.|:            ..||...|..|.....|..:         .:.||::.|||||  
 Frog   132 AHVPASFNVFGMANTINSSNSGHQFGLHLGSKGSSVSQTPRFNPIMVTLAPNIQPSRNTPTSL-- 194

  Fly   251 PLRRAPPLPPPPKPKPGSFSNDSSCLTSPMSSSESELSLNAVPLSSPTSAAATAAAASAAIASTQ 315
               ....:|||             .|.||..:     |:...|.  .||.:.||..|       |
 Frog   195 ---HIHGVPPP-------------ILNSPHGN-----SIYIRPY--VTSQSGTARQA-------Q 229

  Fly   316 QQPSPVRHRSVITLQPE--------------PPYARDFRSIDFP-------------------PT 347
            |.||.|.|...   ||:              |.|:....|:..|                   ||
 Frog   230 QSPSWVSHNPT---QPQQIYQPSQPNPWTTLPTYSAPHTSLQQPTQSSIQGHQTSHVYMPISSPT 291

  Fly   348 TACTPRLPSPSSAASPS--------APGGRKSFTSLNLTLRQPTGSAQSAIDITAGPAPSGQGSG 404
            |...|.|.|..|.:.||        :.|.||:  .:.:.|..|..|..|.:      .||...|.
 Frog   292 TPQAPMLHSSGSGSQPSTQYNIQNISTGPRKN--QIEIKLEPPQRSNSSML------RPSSSRSS 348

  Fly   405 ITYSSVSFDARRGTQKNFQLTV-------TDE------GSVFSAGSVR---------PRTLYATP 447
            ...:|::...|.      |.||       |||      ..|:.:.:.:         |.|::.:.
 Frog   349 ANPASINSQTRN------QPTVYIASPPSTDEMICRNQPKVYISANPQSVDDQVIRNPPTVFISA 407

  Fly   448 CEPVTSVPAN-------------QQPPPPAAVVADGLGDADMTSDVFPYPTQEQNHIVASNYSNN 499
            ....|:.|.|             ..||...|       ..:.||...|.....|.:   :.|:..
 Frog   408 NPGATTAPRNMSGQLSMGPAFIHHHPPKSRA-------HGNSTSATSPRVVVTQPN---TKYTFK 462

  Fly   500 HAVSDNNNIGISNSTDS---SPTMPL--------YEGVMEECD--------REAR---------- 535
            ..||.|....:|....|   .||..|        .||:....|        .|||          
 Frog   463 ITVSPNKPPAVSPGVVSPTFEPTNLLNLTDPFAESEGMQHLTDPILASDKISEARKLSVGSDDAA 527

  Fly   536 --AATIERQKQRRDKLANALRDNKKRLLVLEQEINILTEPVPVGESERLDR-----------DIK 587
              .|.:..||.|.::|...|...||:|..|:.|:|.:...:   ...||:|           :::
 Frog   528 YTQALLVHQKARMERLHRELDVQKKKLDQLKTEVNEMENNL---TKRRLNRSNSLSQIPSLEEMQ 589

  Fly   588 QLTEDCNRLL----DCLNEP----QANGPGPAANPTNRQHLLPASNASQQQPQQQPQPFPRQRQS 644
            || ..|||.|    |||.:.    ||.||          |..|::                    
 Frog   590 QL-RSCNRQLQIDIDCLTKEIDLFQARGP----------HFNPSA-------------------- 623

  Fly   645 ARVQAPPSSLRLHS----------VPAAPISQPVQDFGQHHSSAPTSACLTPQMQSQQQLLQLQQ 699
                       :|:          ||..|..|             .|...||:            
 Frog   624 -----------IHNFYDNIGFLGPVPPKPKDQ-------------RSTSKTPK------------ 652

  Fly   700 EPPPTYAQYYQFQQYLQQQRQQQLQQQMQQQQQLQHQMQQQQQPQPQQEEEFLSDSDVDEEEETL 764
                                                                 :.|:::|:|.. 
 Frog   653 -----------------------------------------------------NTSEMEEDEGA- 663

  Fly   765 DSWACNMCTFRNHPQLNICEACENVR 790
             .|.|..|||.|||.||.||.|:..|
 Frog   664 -HWNCTACTFLNHPALNRCEQCDMPR 688

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tab2NP_001246417.1 CUE_TAB2_TAB3 98..138 CDD:270545 10/46 (22%)
NYD-SP28 528..>602 CDD:291438 28/108 (26%)
ZnF_RBZ 765..789 CDD:197784 13/23 (57%)
RanBP2-type Zn finger 767..786 CDD:275376 12/18 (67%)
tab2NP_001090763.1 CUE_TAB2_TAB3 9..50 CDD:270545 10/37 (27%)
PHA03247 <164..500 CDD:223021 83/394 (21%)
SMC_prok_B <524..>609 CDD:274008 24/88 (27%)
ZnF_RBZ 664..687 CDD:197784 13/22 (59%)
RanBP2-type Zn finger 665..684 CDD:275376 12/18 (67%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 79 1.000 Inparanoid score I5067
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.050

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