DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11906 and ZNF30

DIOPT Version :10

Sequence 1:NP_611402.2 Gene:CG11906 / 37209 FlyBaseID:FBgn0034425 Length:634 Species:Drosophila melanogaster
Sequence 2:NP_001092907.1 Gene:ZNF30 / 90075 HGNCID:13090 Length:624 Species:Homo sapiens


Alignment Length:568 Identity:112/568 - (19%)
Similarity:189/568 - (33%) Gaps:128/568 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    68 RRLSRDWKIHADVIRSTLKAICVECVCKLN-----MHSEVTRSLMQRMQRLQRSGGETTKVTTTT 127
            ||...|.::..|.|.      |.|.....|     :|.:::|   |:.:..|..|    |.....
Human    82 RRWCTDLQLEDDTIG------CKEMPTSENCPSFALHQKISR---QKPRECQEYG----KTLCQD 133

  Fly   128 TSPSQHSPPIADAEVSTTLIESQEEVAHSGQ-SVRSRSSCSVLEVYLAQQPY----------SPS 181
            :.|.||. .|..:|......|..:..::..| ::..|       :::.::||          |.|
Human   134 SKPVQHE-RIHSSEKPNRCKECGKNFSNGHQLTIHQR-------LHVGEKPYKYEKCGKAFISGS 190

  Fly   182 A------KETEEK-------------------HAEGWKWRTRLECHECGRAYFRRDYYAQHLRRC 221
            |      ..|.||                   |......:...||.|||:|:.   .|.:..|..
Human   191 AFVKHGRIHTGEKPLKCKQCGKTISGSYQLTVHKSIHTGKKPYECGECGKAFL---VYGKLTRHQ 252

  Fly   222 SKTRRKQPRPSRVKCRVLNEASYDEEAPSRAIRSSRIYYCRHCDAEFETLISKRQHERMKHQQR- 285
            |....::|.......:..:..||..: ..|...|.:.|.|:.|...|.|.....:|:|:...:: 
Human   253 STHTGEKPFGCEECGKAFSTFSYLVQ-HQRIHTSEKPYECKECGKAFSTSSPLAKHQRIHTGEKP 316

  Fly   286 YPCDLCEAQLDTKYEWEMHHTI--------CQAKQEALAIVEQQEAGQTVMTSRVPRACSMRSRS 342
            |.|..|........:...|.:|        |:...:|..:.....|.|.:.....|..|      
Human   317 YECKECGKSFTVYGQLTRHQSIHTGEKPFECKECGKAFRLSSFLHAHQRIHAEIKPYGC------ 375

  Fly   343 RACSEAWDRYDMDEEEEDEEDEEIESGGEELEEGEE--DAMYARRMNFTGDWIVNHSRSNS---- 401
            :.|...:.|          ....::.|  .|..||:  :.....:...||.::|.|.|.::    
Human   376 KECGRTFSR----------ASYLVQHG--RLHTGEKPYECKECGKAFSTGSYLVQHQRIHTGEKP 428

  Fly   402 ---NSAGNLSLLYGDYGMVETHMTTDKEYD-----------LYLLDLLKTQVRLKSFTCFTPDCG 452
               ...|...:......:.:...|.:|.|:           ::|....|....:|.:.|  .:||
Human   429 YECKECGKAFISRHQLTVHQRVHTGEKPYECKECGKAFRVHVHLTQHRKIHTDVKPYEC--KECG 491

  Fly   453 YQTDTLVALMKHDYMEHWKMSWFYCHKCGDVFTSKVFLDYHMHLQ-NRGLYICHKCREEFELQHQ 516
            ........|::|..: |.....:.|.:||..|:|..:|..|..:. ....|.|:||.:.|.:..|
Human   492 KTFSRASYLVQHSRI-HTGKKPYECKECGKAFSSGSYLVQHQRIHTGEKPYECNKCGKAFTVYGQ 555

  Fly   517 LDRHFQLHRKGINYHCNFCRLEFLSEAKLLAH-----------CKKLG 553
            |..|..:|.....:.|..|...|...:.|..|           |||.|
Human   556 LIGHQSVHTGEKPFECKECGKAFRLNSFLTEHQRVHTGEKPFKCKKCG 603

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11906NP_611402.2 None
ZNF30NP_001092907.1 KRAB 14..75 CDD:214630
COG5048 <97..302 CDD:227381 45/223 (20%)
C2H2 Zn finger 123..143 CDD:275368 6/24 (25%)
C2H2 Zn finger 151..171 CDD:275368 3/26 (12%)
C2H2 Zn finger 179..199 CDD:275368 3/19 (16%)
C2H2 Zn finger 207..227 CDD:275368 1/19 (5%)
C2H2 Zn finger 235..255 CDD:275368 8/22 (36%)
COG5048 245..624 CDD:227381 75/381 (20%)
C2H2 Zn finger 263..283 CDD:275368 3/20 (15%)
C2H2 Zn finger 291..311 CDD:275368 6/19 (32%)
C2H2 Zn finger 319..339 CDD:275368 3/19 (16%)
C2H2 Zn finger 347..367 CDD:275368 4/19 (21%)
C2H2 Zn finger 375..395 CDD:275368 4/37 (11%)
C2H2 Zn finger 403..423 CDD:275368 5/19 (26%)
C2H2 Zn finger 431..451 CDD:275368 1/19 (5%)
C2H2 Zn finger 459..479 CDD:275368 2/19 (11%)
C2H2 Zn finger 487..507 CDD:275368 5/22 (23%)
C2H2 Zn finger 515..535 CDD:275368 7/19 (37%)
C2H2 Zn finger 543..563 CDD:275368 7/19 (37%)
C2H2 Zn finger 571..591 CDD:275368 5/19 (26%)
C2H2 Zn finger 599..619 CDD:275368 4/5 (80%)
Blue background indicates that the domain is not in the aligned region.

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