DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11906 and ZNF250

DIOPT Version :10

Sequence 1:NP_611402.2 Gene:CG11906 / 37209 FlyBaseID:FBgn0034425 Length:634 Species:Drosophila melanogaster
Sequence 2:NP_066405.1 Gene:ZNF250 / 58500 HGNCID:13044 Length:560 Species:Homo sapiens


Alignment Length:442 Identity:88/442 - (19%)
Similarity:144/442 - (32%) Gaps:131/442 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   143 STTLIESQEEVAHSGQSVRSRSSC-------SVL----EVYLAQQPYSPSAKETEEKHAEGWKWR 196
            |:.|::.|.  .|:|:.....|.|       |||    .::..::||                  
Human   211 SSHLLQHQR--IHTGEKPYVCSVCGKAFSQSSVLSKHRRIHTGEKPY------------------ 255

  Fly   197 TRLECHECGRAYFRRDYYAQHLRRCSKTRRKQPRPSRVKCRVLNEASYDEEAPSRAIRSSRIYYC 261
               ||:|||:|:......|||                       ...:..|.|         :.|
Human   256 ---ECNECGKAFRVSSDLAQH-----------------------HKIHTGEKP---------HEC 285

  Fly   262 RHCDAEFETLISKRQHERMKHQQR-YPCDLCEAQLDTKYEWEMHHTI--------CQAKQEALAI 317
            ..|...|..|....||:|:...:| |.|.||....:.......|..:        |....:..::
Human   286 LECRKAFTQLSHLIQHQRIHTGERPYVCPLCGKAFNHSTVLRSHQRVHTGEKPHRCNECGKTFSV 350

  Fly   318 VEQQEAGQTVMTSRVPRACSMRSRSRACSEAW-DRYDMDEEEEDEEDEEIESGGEELEEGEEDAM 381
            .......|.:.|...|..||      .|.:|: ||..:.:.      ..:.:|.:..|..|....
Human   351 KRTLLQHQRIHTGEKPYTCS------ECGKAFSDRSVLIQH------HNVHTGEKPYECSECGKT 403

  Fly   382 YARRMNFTGDWIVNHSRSNSNSAGNLSLLYGDYGMVETHMTTDKEYDLY-----------LLDLL 435
            ::.|..     ::||.|.:                     |.:|.|..|           |:...
Human   404 FSHRST-----LMNHERIH---------------------TEEKPYACYECGKAFVQHSHLIQHQ 442

  Fly   436 KTQVRLKSFTCFTPDCGYQTDTLVALMKHDYMEHWKMSWFYCHKCGDVFTSKVFLDYHM--HLQN 498
            :.....|.:.|  .:||:......:|::|:.: |.....|.|.:||..|:.|..|..|:  |...
Human   443 RVHTGEKPYVC--GECGHAFSARRSLIQHERI-HTGEKPFQCTECGKAFSLKATLIVHLRTHTGE 504

  Fly   499 RGLYICHKCREEFELQHQLDRHFQLHRKGINYHCNFCRLEFLSEAKLLAHCK 550
            :. |.|:.|.:.|.....|.:|.::|.....|.|..|...|.....|:.|.|
Human   505 KP-YECNSCGKAFSQYSVLIQHQRIHTGEKPYECGECGRAFNQHGHLIQHQK 555

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11906NP_611402.2 None
ZNF250NP_066405.1 KRAB 22..82 CDD:214630
COG5048 178..537 CDD:227381 82/422 (19%)
C2H2 Zn finger 201..221 CDD:275368 3/11 (27%)
C2H2 Zn finger 229..249 CDD:275368 5/19 (26%)
C2H2 Zn finger 257..277 CDD:275368 8/42 (19%)
C2H2 Zn finger 285..305 CDD:275368 7/19 (37%)
C2H2 Zn finger 313..333 CDD:275368 4/19 (21%)
C2H2 Zn finger 341..361 CDD:275368 2/19 (11%)
C2H2 Zn finger 369..389 CDD:275368 6/31 (19%)
C2H2 Zn finger 397..417 CDD:275368 5/24 (21%)
C2H2 Zn finger 425..445 CDD:275368 2/19 (11%)
C2H2 Zn finger 453..473 CDD:275368 5/22 (23%)
C2H2 Zn finger 481..501 CDD:275368 7/19 (37%)
C2H2 Zn finger 509..529 CDD:275368 5/19 (26%)
C2H2 Zn finger 537..557 CDD:275368 6/19 (32%)
Blue background indicates that the domain is not in the aligned region.

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