Protein Alignment CG11906 and sqz

DIOPT Version :10

• Sequence 1: NP_611402.2
• Gene: CG11906 / 37209
• FlyBaseID: FBgn0034425
• Length: 634
• Species: Drosophila melanogaster
• Sequence 2: NP_524403.1
• Gene: sqz / 42300
• FlyBaseID: FBgn0010768
• Length: 535
• Species: Drosophila melanogaster
• Alignment Length: 413
• Identity: 76/413 - (18%)
• Similarity: 149/413 - (36%)
• Gaps: 86/413 - (20%)

  Fly    60 LRS-NHVMQRRLSRDWKIH---------ADVIRSTLKAICV----ECVCKLNMHSEVTRSLMQRM 110
            ||| .|:...:|..|:|..         |:.:..:||...|    :.|.:...|.:     .|:.
  Fly    24 LRSLGHLTTAQLVHDYKPFNISEFRQNVAERLDYSLKNGLVQHQQQMVMEQQPHPD-----QQQQ 83

  Fly   111 QRLQRSGGETTKVTTTTTSPSQHSPPIADAEVSTTLIESQEEVAHSGQSVRSRSSCSVLEVYLAQ 175
            |.|.....:........:..:.:|||        |..|.||:.....:|...:...|.     :.
  Fly    84 QHLHHPQQQQHPPQLKVSYSAPNSPP--------TPHEQQEQKYDPNRSPPRQQMSSA-----SG 135

  Fly   176 QPYSPSAKETEEKHAEGWKWRTRLECHECGRAYFRRDYYAQHLR--------RCSKTRRKQPRPS 232
            ...:.|:.|.|.:..:|.:.:. .:|..|.:::....|.:||.|        ||...:||..:.|
  Fly   136 SGSNGSSPEEESRRGDGDQAKP-YKCGSCSKSFANSSYLSQHTRIHLGIKPYRCEICQRKFTQLS 199

  Fly   233 RV-------------KCR------VLNEASYDEEAPSRAIRSSRIYYCRHCDAEFE---TLISK- 274
            .:             |||      ..::.| :.::.||..::.:.:.|..|...|.   ||:..
  Fly   200 HLQQHIRTHTGDKPYKCRHAGCPKAFSQLS-NLQSHSRCHQTDKPFKCNSCYKCFSDEMTLLEHI 263

  Fly   275 RQHERMKHQQRYPCDLCEAQLDTKYEWEMH---HTICQAKQEALAIVEQQEAGQTVMTSRVPRAC 336
            .:|:..||.:.:.|:||......:...:.|   |.....||:.....:.....|.|..|.:....
  Fly   264 PKHKDSKHLKTHICNLCGKSYTQETYLQKHLQKHAEKAEKQQHRHTAQVAAHQQHVPASGIGLNL 328

  Fly   337 SMRSRSRACSEAWDRYDMDEE----EEDEEDEEIESGG----------EELEEGEEDAMYARRMN 387
            ..::.:...:..|.:...|..    .|..:.:..::||          ::.::.:::.::.:|:.
  Fly   329 QRQAMNDVNAAYWAKMGADSAAASLAEAIQQQLPQAGGQPYGNFASLQQQHQQQQQELLHHQRLA 393

  Fly   388 FTGDWIVNHSRSNSNSAGNLSLL 410
            .|    ..||.|....|....|:
  Fly   394 DT----PGHSHSPHEEAAGEDLV 412

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG11906	NP_611402.2	None
sqz	NP_524403.1	C2H2 Zn finger	160..180	CDD:275368	6/19 (32%)
		COG5048	184..>288	CDD:227381	22/104 (21%)
		C2H2 Zn finger	188..208	CDD:275368	4/19 (21%)
		C2H2 Zn finger	216..238	CDD:275368	5/22 (23%)
		C2H2 Zn finger	246..266	CDD:275368	5/19 (26%)
		C2H2 Zn finger	277..297	CDD:275368	4/19 (21%)