DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG11906 and Kah

DIOPT Version :10

Sequence 1:NP_611402.2 Gene:CG11906 / 37209 FlyBaseID:FBgn0034425 Length:634 Species:Drosophila melanogaster
Sequence 2:NP_612040.1 Gene:Kah / 38072 FlyBaseID:FBgn0035144 Length:442 Species:Drosophila melanogaster


Alignment Length:238 Identity:46/238 - (19%)
Similarity:75/238 - (31%) Gaps:65/238 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   327 VMTSRVPRACSMRSRSRACSEAWDRYDMDEEEEDEEDEEIESGGEELEEGEEDAMYARRMNFTGD 391
            |...|..|.|:: |.|.:|:.:                  .|......:..||     .:...|.
  Fly    55 VFDRRKLRRCTI-SDSNSCASS------------------SSSSTSSRQSSED-----HLGLQGH 95

  Fly   392 WIVNHSRSNSNSAGNLSLLYGDYGMV--ETHMTTDKEYDLYLLDLLKTQVRLKSFTCFTPDCG-- 452
            ..|:|.             :|:.|.:  .|.:..|:.                    ..|:||  
  Fly    96 SSVHHH-------------HGEQGEILNSTSLLEDEH--------------------ICPECGKK 127

  Fly   453 YQTDTLVALMKHDYMEHWKMSWFYCHKCGDVFTSKVFLDYHMHLQNRGLYICHKCREEFELQHQL 517
            |.|.:.:|..:..:.........:|..|..|:.|......|:...|:|.. |..|.:.|.....|
  Fly   128 YSTSSNLARHRQTHRSIMDKKARHCPYCEKVYVSMPAYSMHVRTHNQGCE-CQFCGKRFSRPWLL 191

  Fly   518 DRHFQLHRKGINYHCNFCRLEFLSEAKLLAHCKKLGHSPNDEP 560
            ..|.:.|.....:.|..|...|..::.|.||.:.  || |.:|
  Fly   192 QGHIRTHTGEKPFKCGVCEKAFADKSNLRAHIQT--HS-NTKP 231

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11906NP_611402.2 None
KahNP_612040.1 C2H2 Zn finger 121..141 CDD:275368 6/19 (32%)
zf-C2H2 176..198 CDD:395048 5/22 (23%)
C2H2 Zn finger 178..198 CDD:275368 5/19 (26%)
zf-H2C2_2 191..214 CDD:463886 5/22 (23%)
zf-C2H2 204..226 CDD:395048 6/23 (26%)
C2H2 Zn finger 206..226 CDD:275368 6/21 (29%)
C2H2 Zn finger 234..250 CDD:275368
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.