DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG11906 and M03D4.4

DIOPT Version :10

Sequence 1:NP_611402.2 Gene:CG11906 / 37209 FlyBaseID:FBgn0034425 Length:634 Species:Drosophila melanogaster
Sequence 2:NP_001023313.1 Gene:M03D4.4 / 177375 WormBaseID:WBGene00019751 Length:505 Species:Caenorhabditis elegans


Alignment Length:454 Identity:88/454 - (19%)
Similarity:141/454 - (31%) Gaps:180/454 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly   256 SRIYYCRHCDAEFETLISKRQHERMKHQQRYPCDLCEAQLDTKYEWEMHHTICQAKQEALAIVEQ 320
            |.:|.||.|...|.:|...::|||                      |.|.|:.|..||       
 Worm     2 SSLYLCRDCSGAFHSLDELQRHER----------------------EEHETVEQGDQE------- 37

  Fly   321 QEAGQTVMTSRVPRACSMRSRSRACSEAWDRYDMDEEEEDEEDE------EIESGGEELEEGEED 379
                                              ::..||:.||      :||. .:.|.:.:..
 Worm    38 ----------------------------------EDRMEDDSDELAMIKIKIED-SDFLSDTDSS 67

  Fly   380 AMYARRMNFTGDWIVNHSRSNSNSAGNLSLLYGDYGMVETH--MTTDKEYDLYLLDLLKTQVRLK 442
            .:   .||.|       :.|..:|:|.    .|.|...:.|  ....:|        |.|.:|:.
 Worm    68 QL---SMNPT-------TPSEKSSSGE----KGRYECEDCHEMFAVKRE--------LATHMRIH 110

  Fly   443 S----FTCFTPDCGYQTDTLVALMKHDYMEHWKMSWFYCHKCGDVFTSKVFLDYHMHLQNRGL-Y 502
            |    .:|  ..||.:..|...|.|| :|.|.......|..|...|..|..|..|:.:.:.|. :
 Worm   111 SGEQPHSC--TQCGKEFGTRQLLKKH-WMWHTGERSHVCPHCNKAFFQKGHLTQHLMIHSGGRPH 172

  Fly   503 ICHKCREEFELQHQLDRHFQLHRKGINYHCNFCRLEFLSEAKLLAH---CKKLGHSP-------- 556
            .|.:|.:.|..:..|:||.::|::. .:.|..|...||.:..|..|   ||....||        
 Worm   173 ECPQCHKTFIFKFDLNRHMKIHQER-GFSCQQCGRSFLKQVMLDEHHLKCKGKPSSPIRSLLTPT 236

  Fly   557 --------------------NDEPLISIDRSLSIVNCHVPRSSDYSRIVKSYE------------ 589
                                :.|.:..:.:.|.|......|::..:.:||.:|            
 Worm   237 MKAGLESAISIKPPQESMILSSETIAKMAQKLLIQQQENHRNALNTLLVKQHENILNNNNNNESN 301

  Fly   590 ---------EREFYIPRIPMP------------STQP---MHLPQHKPFRFAIGICDFEERNPN 629
                     :..|.||...:|            ::||   :|:..|          ....:|||
 Worm   302 ILNGSVMHKDAGFEIPAPTIPLSLTCMICKSQFNSQPSFTLHMYMH----------HIANQNPN 355

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11906NP_611402.2 None
M03D4.4NP_001023313.1 C2H2 Zn finger 90..110 CDD:275368 5/27 (19%)
zf-H2C2_2 102..125 CDD:463886 8/32 (25%)
C2H2 Zn finger 118..138 CDD:275368 8/22 (36%)
C2H2 Zn finger 146..166 CDD:275368 6/19 (32%)
zf-H2C2_2 158..181 CDD:463886 5/22 (23%)
zf-C2H2 172..194 CDD:395048 6/21 (29%)
C2H2 Zn finger 174..194 CDD:275368 6/19 (32%)

Return to query results.
Submit another query.