DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11906 and LOC100485704

DIOPT Version :10

Sequence 1:NP_611402.2 Gene:CG11906 / 37209 FlyBaseID:FBgn0034425 Length:634 Species:Drosophila melanogaster
Sequence 2:XP_017950222.2 Gene:LOC100485704 / 100485704 XenbaseID:XB-GENE-29077955 Length:959 Species:Xenopus tropicalis


Alignment Length:246 Identity:55/246 - (22%)
Similarity:80/246 - (32%) Gaps:93/246 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   232 GMSTVAAV-LLMYFDEEDTFWALDVLMTNQRYAMHG------LYIVG----FPKLMRFLAHHDRI 285
            |:|..|.: |:..|......:.||:...:|...:.|      ::..|    ||...:||....| 
 Frog  1043 GLSLDAVLGLVRCFSTLQWLFRLDISFESQHILLRGDKTSRDMWATGSLPDFPAAAKFLGFRQR- 1106

  Fly   286 LTKCLPKVKKHLDKHEVHSVLYSLKWFFVIFIERIPFSLCLRVWDIYMMYGERVLTAMAYTILKV 350
               |:|:                              ||||         .|..|...:.|.|  
 Frog  1107 ---CIPR------------------------------SLCL---------SECPLEPPSLTRL-- 1127

  Fly   351 HKTKLLRMKDMDQVTDFLQTSLHKQFGYDDDYVIKALQSSMDELKKLKLL-----NLPPPS---- 406
                ...:||.....: ||.|..    :..|..::.|...:.:|.:|.||     .|.|.|    
 Frog  1128 ----CATLKDCPGPLE-LQLSCE----FLSDQSLETLLDCLPQLPQLSLLQLSQTGLSPKSPFLL 1183

  Fly   407 ANELPTMPRGQTVEPSTKARIGHRNEQFSEREIALKETVLYRSESKNEEEE 457
            ||.|...||.:.|:    .|..|.            .|:.:||   |||||
 Frog  1184 ANTLSLCPRVKKVD----LRSLHH------------ATLHFRS---NEEEE 1215

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11906NP_611402.2 None
LOC100485704XP_017950222.2 COG5048 <210..417 CDD:227381
C2H2 Zn finger 231..251 CDD:275368
C2H2 Zn finger 258..278 CDD:275368
C2H2 Zn finger 308..328 CDD:275368
C2H2 Zn finger 336..356 CDD:275368
C2H2 Zn finger 377..397 CDD:275368
COG5048 401..836 CDD:227381
C2H2 Zn finger 405..425 CDD:275368
C2H2 Zn finger 433..453 CDD:275368
C2H2 Zn finger 461..481 CDD:275368
C2H2 Zn finger 489..509 CDD:275368
C2H2 Zn finger 517..537 CDD:275368
C2H2 Zn finger 545..565 CDD:275368
C2H2 Zn finger 573..593 CDD:275368
C2H2 Zn finger 601..621 CDD:275368
C2H2 Zn finger 629..649 CDD:275368
C2H2 Zn finger 657..677 CDD:275368
C2H2 Zn finger 685..705 CDD:275368
C2H2 Zn finger 713..733 CDD:275368
C2H2 Zn finger 741..761 CDD:275368
C2H2 Zn finger 769..789 CDD:275368
C2H2 Zn finger 797..817 CDD:275368
C2H2 Zn finger 825..845 CDD:275368
zf-H2C2_2 837..862 CDD:463886
C2H2 Zn finger 853..873 CDD:275368
zf-C2H2 878..900 CDD:395048
C2H2 Zn finger 880..900 CDD:275368
zf-H2C2_2 892..915 CDD:463886
C2H2 Zn finger 908..928 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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