DRSC/TRiP Functional Genomics Resources

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Protein Alignment tbrd-2 and ITC1

DIOPT Version :9

Sequence 1:NP_611401.2 Gene:tbrd-2 / 37207 FlyBaseID:FBgn0034423 Length:674 Species:Drosophila melanogaster
Sequence 2:NP_011382.1 Gene:ITC1 / 852744 SGDID:S000003101 Length:1264 Species:Saccharomyces cerevisiae


Alignment Length:744 Identity:126/744 - (16%)
Similarity:237/744 - (31%) Gaps:193/744 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 KPLSVKLKLPNRVQPEFIPHPG----MAGRYTNKLHYFKKHLLDEARKKKYALDFLEPVDTEALM 65
            |||.:.|    .||...|...|    ....:..:..::.:|...........|.|.:.:|:|.  
Yeast    15 KPLPLDL----NVQVWHIEETGEWFSSYEEFLERFDFYTRHHFTCEITGTSCLTFFQALDSEE-- 73

  Fly    66 VPTYYTVIHRPMDIGTIVKRVQNNYYKSVNEAIADFKQI----------------ISNCFLFNRS 114
                           |..|.|::.:...:.|.:|.|...                ..|.|.   .
Yeast    74 ---------------TQFKYVEDRFPLKLREPVARFLHFNGIRRLDALVEKVYARFKNDFF---P 120

  Fly   115 GDVVYRKGQMLEKFFHKKLRGMPSGPEVPCNRDPKAVGRP-------------RTNAPSSAQTER 166
            |:|||.:.|  :...........|.|:.....:..:||.|             :.....:|....
Yeast   121 GEVVYLRKQ--KDSSTTSSNSQQSTPQPDDMVEINSVGNPGLPQYQYQRRYVIKEKVQFNATINP 183

  Fly   167 KCRELLKKLQS---ITNQTDAMTRNFFSNKWDSLQKKVDR-QYFKSVNEFCLHVDGCFRKYHEPA 227
            :.||::....:   :..:..:..::|.          ||: |.::..:.|..|:..||      .
Yeast   184 ESREIVMPAHTKYMLIEEAASSNKSFI----------VDQGQIYRDRSTFTKHLIKCF------F 232

  Fly   228 KILYERVFNQPAA-WCTSMNGNSSLESALNAADLNELLAAAKLTVNSLMQCVQMPGSGEPLTAKS 291
            ||..:|..::..| ||..                .|.||...||:......::.. ..||:.|:.
Yeast   233 KITLQRASSKMGAPWCVK----------------PEYLAMYGLTMEWPKDMLKYK-EDEPVVARR 280

  Fly   292 LVETFCDTLNKMINKME---AGQRNSPNPSSSKRQKMSPEQETDL-----------------VQG 336
            .......:.....||.:   :|:.|:.|.:|:|::.....:.|::                 |..
Yeast   281 SNSANVSSPESEKNKRQSKSSGKSNTSNDASNKKETKKKRKPTEVNDSENNSSEEDKKKGQNVTS 345

  Fly   337 EFKPAMELLSGNEIDNLMAVSIESSDDEAIDASMRITDADRCATQKLFAKLPTNAMKEIIHMVQQ 401
            |..........||..|  ..::||....|......:|.........|..:.|.|....:.:..::
Yeast   346 ETHSKKRKKEANEEPN--TENVESVPTPANAEPQAVTITSIMDDLALPYQHPPNIFPNLTYYNEK 408

  Fly   402 IEGFSSENCGDLS--FDVKGLATDTMIMMKSAVTKATRAHSKL-----KLKDMQPSEKEGLQRAL 459
            :|..|..:. .||  ||..|........:.:..:|...:|..|     .||...|.|.:|     
Yeast   409 LECISLGST-KLSRPFDSFGKLLQAYQFLNTFGSKICLSHFSLDQFITSLKCTDPYELKG----- 467

  Fly   460 QSQLVNITRMLNKNRRRCGPLINFRNK-----------------NNTANNVVRKRATAPLTAKLK 507
            :..||||....:|.:......:..:||                 |:...:::.||.:..:..|: 
Yeast   468 EVVLVNIRTQTSKEQEIENNGLPMKNKAETTTEEDSENPSDWQRNSFIRDMIMKRNSDKVEYKI- 531

  Fly   508 PLQANVMAPQLGAGVVETHNLSDTSDDDVSAPVKLSAIGGTPMRNLPINSNPLQMQPIRSPPKL- 571
                             .|:  |.:.||:             :.|:..|.:.|.::...:..:| 
Yeast   532 -----------------VHD--DPASDDI-------------LDNINHNGSALLIEVFTALLRLF 564

  Fly   572 --------PHVVELQMSSSSSSESEMKSKSGRLSRSRSRSMSDTKLRPRSNSSASSRSNSSSSSG 628
                    ..|||..:........|.|.:.|.....:.|:.....|:.:  ....:..::...:.
Yeast   565 INEEGDWSCIVVENWIIDDKGVLMERKDERGEGEAKQKRNAHGYFLQDK--EKIDNLKDTLKENA 627

  Fly   629 SNAGSSSGSRSRSSSSSSSSSNNSSESND 657
            :.....|.:::.::|.|.|.|::.||..|
Yeast   628 TEVQKESDAKNETNSESDSKSDSDSEERD 656

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tbrd-2NP_611401.2 Bromo_gcn5_like 34..136 CDD:99941 18/117 (15%)
ITC1NP_011382.1 WAC_Acf1_DNA_bd 24..124 CDD:402251 17/119 (14%)
DDT 423..483 CDD:214726 16/64 (25%)
WSD 869..952 CDD:406128
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5076
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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