DRSC/TRiP Functional Genomics Resources

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Protein Alignment tbrd-2 and BDF1

DIOPT Version :9

Sequence 1:NP_611401.2 Gene:tbrd-2 / 37207 FlyBaseID:FBgn0034423 Length:674 Species:Drosophila melanogaster
Sequence 2:NP_013503.1 Gene:BDF1 / 851115 SGDID:S000004391 Length:686 Species:Saccharomyces cerevisiae


Alignment Length:624 Identity:115/624 - (18%)
Similarity:220/624 - (35%) Gaps:163/624 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 LKLPNRVQPEFIPHPGMAGRYTNKL-HYFKKHLL---DEARKKKYALDFLEPVDTEALMVPTYYT 71
            :::|....|...|.|.|.....|.: .:.:||.|   ...::.|.|..||:|||...|.:|.|:.
Yeast   125 MEVPKEPAPAPPPEPDMNNLPQNPIPKHQQKHALLAIKAVKRLKDARPFLQPVDPVKLDIPFYFN 189

  Fly    72 VIHRPMDIGTIVKRVQNNYYKSVNEAIADFKQIISNCFLFNRSGDVVYRKGQMLEKFFHKKLRGM 136
            .|.||||:.||.:::....|:...:...||..:::|...||.....:.:..:.::..|.|.:..|
Yeast   190 YIKRPMDLSTIERKLNVGAYEVPEQITEDFNLMVNNSIKFNGPNAGISQMARNIQASFEKHMLNM 254

  Fly   137 PS---------GPEVPCNRDPKAV--------GRPR---------------TNAPSS---AQTER 166
            |:         |.......|...|        |||:               :..|.|   .|..:
Yeast   255 PAKDAPPVIAKGRRSSAQEDAPIVIRRAQTHNGRPKRTIHPPKSKDIYPYESKKPKSKRLQQAMK 319

  Fly   167 KCRELLKKLQS---------ITNQTDAMTRN------FFSNKWD--SLQKKVDRQYFKSVNEFCL 214
            .|:.:||:|.:         .....|.::.|      :.....|  ::.||::...::::.:|..
Yeast   320 FCQSVLKELMAKKHASYNYPFLEPVDPVSMNLPTYFDYVKEPMDLGTIAKKLNDWQYQTMEDFER 384

  Fly   215 HVDGCFRK---YHEPAKIL------YERVFNQPAAWCTSMN-------------GN-SSLESALN 256
            .|...|:.   ::....|:      .|.|||  :.|....|             |: ...||..:
Yeast   385 DVRLVFKNCYTFNPDGTIVNMMGHRLEEVFN--SKWADRPNLDDYDSDEDSRTQGDYDDYESEYS 447

  Fly   257 AADLNELLAAAKLTVNSLMQCVQMPGSGEPLTAKSLVETFCDTL---------NKMINKMEAGQR 312
            .:|::|     .:..|..:|.::...:...:..:.|.:...:.:         :|...|...|:.
Yeast   448 ESDIDE-----TIITNPAIQYLEEQLARMKVELQQLKKQELEKIRKERRLARGSKKRGKRSKGRS 507

  Fly   313 NSPNPSSSKRQKMSPEQETDLVQGEFKPAMELLSGNEIDNLMAVSIESSDDEAIDASMRITDADR 377
            .|.|.||..|:....:.:|.:..                                      |..|
Yeast   508 GSKNASSKGRRDKKNKLKTVVTY--------------------------------------DMKR 534

  Fly   378 CATQKLFAKLPTNAMKEIIHMVQQIEGFSSENCGDLSFDVKGLATDTMIMMKSAVTKATRAHSKL 442
            ..|::: ..|||:.::..|.::::.....||: .::..|:..|...|::.:.:...:        
Yeast   535 IITERI-NDLPTSKLERAIDIIKKSMPNISED-DEVELDLDTLDNHTILTLYNTFFR-------- 589

  Fly   443 KLKDMQPSEKEGLQRALQSQLVNITRMLNK-------NRRRCGPLINFRNKNNTANNVVRKRATA 500
                 |.....|....|.. ...:||..:.       :|:|....::...::.....:..|.|  
Yeast   590 -----QYESSSGASNGLDG-TSGVTRDASSLSPTSAGSRKRRSKALSQEEQSRQIEKIKNKLA-- 646

  Fly   501 PLTAKLKPLQANVMAPQLGAGVVETHN-LSDTSDDDVSA 538
             :.....||..|....|:.:.   .|| .|.:||||||:
Yeast   647 -ILDSASPLSQNGSPGQIQSA---AHNGFSSSSDDDVSS 681

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tbrd-2NP_611401.2 Bromo_gcn5_like 34..136 CDD:99941 28/105 (27%)
BDF1NP_013503.1 COG5076 1..373 CDD:227408 54/247 (22%)
Bromodomain <339..417 CDD:413371 13/79 (16%)
PTZ00108 <386..647 CDD:240271 47/324 (15%)
BET 527..589 CDD:407211 12/101 (12%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5076
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
21.860

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