DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment tbrd-2 and GTE7

DIOPT Version :9

Sequence 1:NP_611401.2 Gene:tbrd-2 / 37207 FlyBaseID:FBgn0034423 Length:674 Species:Drosophila melanogaster
Sequence 2:NP_201366.3 Gene:GTE7 / 836689 AraportID:AT5G65630 Length:590 Species:Arabidopsis thaliana


Alignment Length:658 Identity:119/658 - (18%)
Similarity:201/658 - (30%) Gaps:286/658 - (43%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 LLDEARKKKYALDFLEPVDTEALMVPTYYTVIHRPMDIGTIVKRVQNNYYKSVNEAIADFKQIIS 106
            :|.:..|.|:|..|..|||...|.:..|:.|:.:|||:||:...:...:|.|..:...|.:....
plant   176 ILVKLMKHKWAWVFNTPVDVVGLGLHDYHQVVKKPMDLGTVKLNLDKGFYVSPIDFATDVRLTFD 240

  Fly   107 NCFLFNRSG-DVVYRKGQMLEKF-------FHK------KLRGMPSGPEV---------PCNRDP 148
            |...:|..| ||.:...::|:.|       |.|      ||.|..|.||.         ..|::|
plant   241 NAMTYNPKGQDVYFMADKLLDHFDGMFNPAFKKFEAQQLKLTGSSSRPEPDFKPDFKQRQWNQNP 305

  Fly   149 KAVGRPRTNAPSSAQTERKCRELLKKLQSITNQTDAMTRNFFSNKWDSLQKKVDRQYFKSVNEFC 213
            ..|..||..                     |.|.             |:.||:|           
plant   306 PMVANPRKG---------------------TEQI-------------SIAKKLD----------- 325

  Fly   214 LHVDGCFRKYHEPAKILYERVFNQPAAWCTSMNGNSSLESALNAADLNELLAAAKLTVNSLMQCV 278
                                                                           .|
plant   326 ---------------------------------------------------------------SV 327

  Fly   279 QMPGSGEPLTAKSLVETFCDTLNKMINKMEAGQRNSPNPSSSKRQKMSPEQETDLVQGEF----- 338
            :.|   :|.....|||                        .|:.|..||.....::|.|.     
plant   328 KPP---QPTLPPQLVE------------------------PSRVQSPSPPPPPPVIQPELPQPQP 365

  Fly   339 -KPAMELLSGNEIDNLMAVSIESS-------DDEAIDASMRI-TDADRCATQKLFAKLPTNAMKE 394
             .|.:|:    |::....||..|.       ..:|.|.:.|: |..::.........||...:.:
plant   366 PPPQLEI----EVEAPPDVSEVSKGRKGKLPKPKAKDPNKRLMTMEEKSKLGMNLQDLPPEKLGQ 426

  Fly   395 IIHMVQQIEGFSSENCGDLSFDVKGLATDTMIMMKSAVTKATRAHSKLKLKDMQPSEKEGLQRAL 459
            ::.::::..|..:::..::..|::.:..:|:..:...||...:..||:|        ::|.    
plant   427 LLQILRKRNGHLAQDGDEIELDIEAVDNETLWELDRFVTNYKKMASKIK--------RQGF---- 479

  Fly   460 QSQLVNITRMLNKNRRRCGPLINFRNKNNTANNVVRKRATAPLTAKLKPLQANVMAPQLGAGVVE 524
                                              :|..:|.|..      .|:|  .::|:....
plant   480 ----------------------------------IRNVSTPPRN------MASV--AEMGSAEKR 502

  Fly   525 THNLSDTSDDDVSAPVKLSAIGGTPMRNLPINSNPLQMQPIRSPPKLPHVVELQMSSSSSSESEM 589
            |.. .|..::||.       ||    .::||...|              .||::...::.:    
plant   503 TRR-GDAGEEDVD-------IG----EDIPIEDYP--------------SVEIERDGTAVA---- 537

  Fly   590 KSKSGRLSRSRSRSMSDTKLRPRSNSSASSRSNSSSSSGSNAGSSSGSRSRSSSSSSSSSNNSSE 654
                                     ::|||.|:||.||.|:.||||.|.| .|..|||.|::.::
plant   538 -------------------------AAASSGSSSSGSSSSSGGSSSSSDS-GSGGSSSGSDSDAD 576

  Fly   655 SNDSSDVE 662
            |..|..||
plant   577 SVQSPFVE 584

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tbrd-2NP_611401.2 Bromo_gcn5_like 34..136 CDD:99941 30/107 (28%)
GTE7NP_201366.3 Bromo_plant1 169..267 CDD:99938 26/90 (29%)
BET 404..466 CDD:374956 7/61 (11%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5076
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 89 1.000 Inparanoid score I2283
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
32.910

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