DRSC/TRiP Functional Genomics Resources

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Protein Alignment tbrd-2 and AT5G46550

DIOPT Version :9

Sequence 1:NP_611401.2 Gene:tbrd-2 / 37207 FlyBaseID:FBgn0034423 Length:674 Species:Drosophila melanogaster
Sequence 2:NP_199467.2 Gene:AT5G46550 / 834698 AraportID:AT5G46550 Length:494 Species:Arabidopsis thaliana


Alignment Length:464 Identity:96/464 - (20%)
Similarity:157/464 - (33%) Gaps:138/464 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 LDEAR-KKKYALD----------------------FLEPVDTEALMVPTYYTVIHRPMDIGTIVK 84
            |||.: |||..||                      |.||||...:.:|.|:.||.:|||:||:..
plant    54 LDEVQPKKKQRLDCDWSSQCLALLRFLMEHRGGWLFKEPVDPVKMEIPDYFNVIQKPMDLGTVKS 118

  Fly    85 RVQNNYYKSVNEAIADFKQIISNCFLFNRSGDVVYRKGQMLEKFFH--------KKLRGMPSGPE 141
            ::..|.|.:.:|..||.:...:|...:|...:.|:...:.:.:.|.        ||:..: |..|
plant   119 KLLKNVYSNADEFAADVRLTFANAMHYNPLWNEVHTIAKEINEIFEVRWESLMKKKVLRL-SWNE 182

  Fly   142 V-------PCNRDPKAVGRPRTNAPSSAQTERKCRELLK---------KLQSITNQTDAMTRNFF 190
            |       |..||........|:|.|.....:..:|..:         |:||..| |.|:|....
plant   183 VREGYKRQPVERDCSRRSSTGTSASSGVGLTKPAKENSEKGSLSSKPVKVQSKKN-TPAVTPKAL 246

  Fly   191 SNKWDSLQKKVDRQYFKSVNEFCLHVDGCFRKYHEPAKILYERVFNQPAAWCTSM----NG---- 247
            :.             .|.....|:.:..|.....:...:...::.|...|..:.:    ||    
plant   247 AT-------------CKCGRIICICLKSCSSFGSDVCSLTDCQLKNISGAQASELDPQSNGSDTS 298

  Fly   248 ----NSSLESALNAADLNELLAAAKLTVNSLMQCVQMPGSGEPLTAKSLVETFCDTLNKMINKME 308
                |.||:|.|:....::||.....|....:..|.   ..:.|.|..|...:..|:.|..:::.
plant   299 KKERNGSLKSQLDKPSNSDLLGNELKTAFPALPPVP---PEKALRAAILKAQYAGTIIKAKHRIV 360

  Fly   309 AGQRNSPNPSSSKRQKMSPEQETDLVQGEF-KPAMELLSGNEIDNLMAVSIESSDDEAIDASMRI 372
            .||.|                :.||::.:. |..||             ..:..:...|:|.||.
plant   361 LGQNN----------------KADLIRIQIEKEQME-------------RAQREEKARIEAEMRA 396

  Fly   373 TD-ADRCATQKLFAKLPTNAMKEIIHMVQQIEGFSSENCGDLSFDVKGLATDTMIMMKSAVTKAT 436
            .. |:|...|.   :|......:.:.:.:..:||..|.                           
plant   397 AKVAERMRAQD---ELKQKRESQRLEIAKMKKGFDFER--------------------------- 431

  Fly   437 RAHSKLKLK 445
            ..|||||.|
plant   432 NNHSKLKKK 440

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tbrd-2NP_611401.2 Bromo_gcn5_like 34..136 CDD:99941 33/123 (27%)
AT5G46550NP_199467.2 Bromo_plant1 69..167 CDD:99938 23/97 (24%)
DUF2058 <339..>442 CDD:421361 30/161 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5076
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
21.860

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