DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment tbrd-2 and GTE8

DIOPT Version :9

Sequence 1:NP_611401.2 Gene:tbrd-2 / 37207 FlyBaseID:FBgn0034423 Length:674 Species:Drosophila melanogaster
Sequence 2:NP_001327403.1 Gene:GTE8 / 822345 AraportID:AT3G27260 Length:822 Species:Arabidopsis thaliana


Alignment Length:667 Identity:133/667 - (19%)
Similarity:221/667 - (33%) Gaps:198/667 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    55 FLEPVDTEALMVPTYYTVIHRPMDIGTIVKRVQNNYYKSVNEAIADFKQIISNCFLFNRSGDVVY 119
            |..|||...|.:|.|.|.|..|||:||:.|.:.:..|.|.:|..||.:...:|...:|..|..|:
plant   196 FQAPVDVVKLNIPDYLTTIKHPMDLGTVKKNLASGVYSSPHEFAADVRLTFTNAMTYNPPGHDVH 260

  Fly   120 RKGQMLEKFFH-------KKL-----RGMPSGPEVPCNRDPKAVGRPRTNAPSSAQTERK-CREL 171
            ..|.:|.|.|.       |||     :.:|:....|.:....|:..|.......|...|: ..|.
plant   261 IMGDILSKLFEARWKTIKKKLPPCSMQTLPAVTLEPNDERKAAISVPPAKKRKMASPVRESVPEP 325

  Fly   172 LKKLQSITNQTDAMTRNFFSNKWDSLQKKVDRQYFKSVNEFCLHVDGCFRKYHEPAKILYERVFN 236
            :|.|.:                 :..:.::.||....::|...|:....:|::.           
plant   326 VKPLMT-----------------EVERHRLGRQLESLLDELPAHIIDFLKKHNS----------- 362

  Fly   237 QPAAWCTSMNGNSSLESALNAADLNELLAAAKLTVNSLMQCVQMPGSGEPLTAKSLVETFCDTLN 301
                     ||....|..:. .|::.|.....:|:.:|                         |:
plant   363 ---------NGGEIAEDEIE-IDIDVLSDEVLVTLRNL-------------------------LD 392

  Fly   302 KMINKMEAGQR----------NSPNPSSSKRQKMSPEQETDLVQGEFKPAMELLSGNEIDNLMAV 356
            :.|...||.|.          |...||:|..|: ..|...:.|.|...|...  |.::.|:    
plant   393 EYIQNKEAKQTNVEPCEIELINGSRPSNSSLQR-GNEMADEYVDGNEPPISR--SSSDSDS---- 450

  Fly   357 SIESSDDEAIDASMRITDADRCATQKLFAKLPTNAMKEIIHMVQQIEGFSSENCGDLSFDVKGLA 421
              .||:|::.||...:        |...:|:|..|              :||...|.:..:..|.
plant   451 --GSSEDQSDDAKPMV--------QGDSSKMPETA--------------NSEAQRDENTRIDDLF 491

  Fly   422 TDTMIMMKSAVTKATRAHSKLKL---KDMQPSEKEGLQRALQSQLVNI--TRMLNKNRRRCGPLI 481
            ..::.:....:|::|.|..::.:   :.:...|.:|....      ||  |...::.|.|...| 
plant   492 VGSLCITGVFITESTGALEQMDICSQQKLSSDESDGQHEG------NILETPASSEKRYRAALL- 549

  Fly   482 NFRNKNNTANNVVRKRATAPLTAKLKPLQANVMAPQLGAGVVETHNLSDTSDDDVSAPVKLSAIG 546
                ||..|:.:        |.|:.|||      ||.|                         |.
plant   550 ----KNRFADII--------LKAREKPL------PQNG-------------------------IK 571

  Fly   547 GTPMRNLPINSNPLQMQPIRSPPKLPHVVELQMSSSSSSESEMKSKSGRLSRSRSRSMSDTKLRP 611
            |.|.| |......|.:|..:...:|....|....:...:|:|..:::...:: |.|.:.....|.
plant   572 GDPER-LRKEREELVLQKKKEKARLQAEAEAAEDARRQAEAEAAAEAAAEAK-RKRELEREAARQ 634

  Fly   612 ---RSNSSASSRSNS---------SSSSGSNAGSSSGSRSRSSSSSSSSSNNSSESN-------- 656
               :...:.....||         |||:.....||:...|......:..|.|...||        
plant   635 ALLKMEKTVEINENSRFLEDLEMLSSSAPEQLPSSAEETSPERPLDALGSFNLRGSNPLEQLGLY 699

  Fly   657 ----DSSDVEVVPNVPE 669
                |..:....|.||:
plant   700 MKQDDDEEEPEAPAVPK 716

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tbrd-2NP_611401.2 Bromo_gcn5_like 34..136 CDD:99941 31/92 (34%)
GTE8NP_001327403.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5076
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
32.860

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