DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment tbrd-2 and Brd8

DIOPT Version :9

Sequence 1:NP_611401.2 Gene:tbrd-2 / 37207 FlyBaseID:FBgn0034423 Length:674 Species:Drosophila melanogaster
Sequence 2:NP_651685.2 Gene:Brd8 / 43460 FlyBaseID:FBgn0039654 Length:872 Species:Drosophila melanogaster


Alignment Length:464 Identity:94/464 - (20%)
Similarity:168/464 - (36%) Gaps:125/464 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   257 AADLNELLAAAKLTVNS--------LMQCVQMPGSGEPLTAKSLVETFCDTLNKMINKMEAGQRN 313
            :|.:.|.|..:::.:::        |...|...|....:|....::|.|            |..:
  Fly     2 SAGVQERLQLSRMPLDTWSKREQLILASAVSCSGDQNWITVSRTLKTIC------------GNGS 54

  Fly   314 SPNPSSSKRQKMSPEQETDLVQGEFKPAMELLSGNEIDNLMAV-----SIESSDDEAIDASMRIT 373
            |..|:....||              ..||:.  ||.::::.|.     |.|||...:..|::   
  Fly    55 SNRPADWFSQK--------------NCAMQY--GNLLESVEATKRKKRSSESSAGVSSPATV--- 100

  Fly   374 DADRCATQKLFAKLPTNAMKEIIHMVQQIEGFSSENCGDLSFDVKGLATDTMIMMKSAVTKATRA 438
               ...|:.|..:|......||...::|    ..|....:..:::.|.:|       |||:.   
  Fly   101 ---ETPTELLLRRLTEERQAEIKAQMRQ----DQETYRRIQREIESLQSD-------AVTEQ--- 148

  Fly   439 HSKLKLKDM-QPSEKEGLQRALQSQLVNITRMLNKNRRRCGPLINFRNKN--------------- 487
                :|:|| ...|||...|.::...:. .||..:.:|:.....|:||.:               
  Fly   149 ----ELQDMWLEIEKEQEARRIEEMKLE-NRMREREQRKKDLASNWRNSSLAVKRSNQAADTTSV 208

  Fly   488 -------NTANNVVRKRATAP---LTAKLKPLQANVMAPQLGAGVVETHNLSDTSDDDVSAPVKL 542
                   ||:.|  .|:.|.|   ||:.||....|..|.....|...... ...|....:||...
  Fly   209 DMDVEDINTSGN--GKQQTGPSPLLTSLLKSPTGNAPATPTPGGAAPAAG-GTGSVARATAPTIT 270

  Fly   543 SAIGGTP---MRNLPI------NSNPLQMQPIRSPPKLPHVVELQMSSSSSSESEMKSKSGRLSR 598
            |.:...|   :.|.|:      .......:||..||              :||:   |.:..|.|
  Fly   271 SLLTSGPSSAVANQPVITMKSPTDAAFMSRPITGPP--------------ASEA---STTPTLER 318

  Fly   599 SRSRSMSDTKLRPRSNSSASSRSNSSSSSGSNAGSSS---GSRSRSSSSSSSSSNNSSESNDSSD 660
            |.|::.....:....| .|::::|.|.|.....||.:   |....:||::.::.::.::.|::..
  Fly   319 SPSQAAPTLSMLLEKN-MAAAKANESGSLVKPEGSGNQEQGVDEATSSAAGTADSDEADPNEAQL 382

  Fly   661 VEVVPNVPE 669
            :||..|:.:
  Fly   383 LEVFKNIDQ 391

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tbrd-2NP_611401.2 Bromo_gcn5_like 34..136 CDD:99941
Brd8NP_651685.2 PaaSYMP <105..188 CDD:291408 21/101 (21%)
PHA03249 402..>582 CDD:223023
Bromo_brd8_like 729..833 CDD:99939
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5076
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.