DRSC/TRiP Functional Genomics Resources

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Protein Alignment tbrd-2 and Brdt

DIOPT Version :9

Sequence 1:NP_611401.2 Gene:tbrd-2 / 37207 FlyBaseID:FBgn0034423 Length:674 Species:Drosophila melanogaster
Sequence 2:NP_001012031.1 Gene:Brdt / 305123 RGDID:1306678 Length:326 Species:Rattus norvegicus


Alignment Length:173 Identity:62/173 - (35%)
Similarity:95/173 - (54%) Gaps:3/173 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 SVKLKLPNRVQPEFIPHPGMAGRYTNKLHYFKKHLLDEARKKKYALDFLEPVDTEALMVPTYYTV 72
            |.::.:.|...||:| :....||.||:|.:.::.:|....|..::..|.:|||...|.:|.|||:
  Rat     5 SRQMAIVNPPPPEYI-NAKKTGRLTNQLQFLQRVVLKALWKHSFSWPFQQPVDAAKLKLPDYYTI 68

  Fly    73 IHRPMDIGTIVKRVQNNYYKSVNEAIADFKQIISNCFLFNRSGDVVYRKGQMLEKFFHKKLRGMP 137
            |..|||:.||.||::|.||:..:|.:.||..:.|||:|:|:.||.:....|.|||.|.:||..||
  Rat    69 IETPMDLSTIKKRLENRYYEKASECVGDFNTMFSNCYLYNKPGDDIVVMAQALEKLFMQKLSQMP 133

  Fly   138 SGPEVPCNRDPKAVGRPRTNAPSSA--QTERKCRELLKKLQSI 178
            ...::...::.......:..|.|||  ||..|..|.:.|.|.|
  Rat   134 QEEQIVGGKERMKKDIQQKTAVSSAKEQTPSKSAENVFKRQEI 176

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tbrd-2NP_611401.2 Bromo_gcn5_like 34..136 CDD:99941 40/101 (40%)
BrdtNP_001012031.1 Bromo_Brdt_I_like 26..132 CDD:99929 43/105 (41%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 141..168 7/26 (27%)
Nuclear localization signal. /evidence=ECO:0000250|UniProtKB:Q58F21 208..219
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 209..257
Bromodomain 271..>322 CDD:295360
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

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