DRSC/TRiP Functional Genomics Resources

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Protein Alignment tbrd-2 and brd2a

DIOPT Version :9

Sequence 1:NP_611401.2 Gene:tbrd-2 / 37207 FlyBaseID:FBgn0034423 Length:674 Species:Drosophila melanogaster
Sequence 2:NP_571275.2 Gene:brd2a / 30445 ZFINID:ZDB-GENE-990415-248 Length:836 Species:Danio rerio


Alignment Length:865 Identity:174/865 - (20%)
Similarity:296/865 - (34%) Gaps:283/865 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 KLKLPNRVQPEF----IPH-------------PGMAGRYTNKLHYFKKHLLDEARKKKYALDFLE 57
            :::.|:.:...|    :||             |...||.||:|.:.:|.|:....:..:|..|.|
Zfish    35 RIRKPSLLYEGFEGPALPHIAQSGPPQPAVRDPSRQGRMTNQLQFLQKALVKTLWRHHFAWPFHE 99

  Fly    58 PVDTEALMVPTYYTVIHRPMDIGTIVKRVQNNYYKSVNEAIADFKQIISNCFLFNRSGDVVYRKG 122
            |||...|.:|.||.:|.:|||:|||.||::||||:|.:|.:.||..:.:||:::|:..|.:....
Zfish   100 PVDAAKLNLPDYYNIIKQPMDMGTIKKRLENNYYRSASECMQDFNTMFTNCYIYNKPTDDIVLMA 164

  Fly   123 QMLEKFFHKKLRGMPSGPEVPCNRDPKAVGRPRTNAPSSAQ-------TERKCRELLKKLQSI-- 178
            |.|||.|.:|:..||...|    ..|..|.|.:.:.|...|       |.......:..|..:  
Zfish   165 QSLEKAFLQKVAQMPEVEE----EIPAPVPRGKQSKPKKGQKLFSGGITTAHQVPAISSLSQLAY 225

  Fly   179 -------------TNQTDAMTRNF------------------FSNKWDSLQKKVDRQY-FKSVNE 211
                         |.....:|:||                  .:.|...:::|.|... ..:|..
Zfish   226 SPPTPDTPDSVLSTPPQTLITKNFPPPPLHSTPALLGLPPTQPTAKKKGVKRKADTTTPTTTVMP 290

  Fly   212 FCLHVDGCFRKYHEPAKILYERVFNQPAAWCTSM--------NGNSSLESALNAADLNELLAAAK 268
            ..|.|.|                .........||        .|:|.|..:....|..:.|:   
Zfish   291 LTLGVGG----------------MGMGMGMGMSMGMGMGMGLGGDSPLTLSNMGMDSKQSLS--- 336

  Fly   269 LTVNSLMQCVQMP----GSGEPL--TAKSLVET-----------------FCDT-LNKMINKMEA 309
            |::...:: .::|    |||.|:  ..|.|.::                 :|.| |.::::|...
Zfish   337 LSLGMSLE-DKVPARRGGSGRPIKPPRKDLPDSQNQHQPVRRGKLSQQLRYCSTILKELLSKKHT 400

  Fly   310 GQR---------------------NSPNPSSSKRQKMSPEQETDLVQGEFKPAMELLSGNEIDNL 353
            ...                     ..|...|:.::||...:..|.:|  |...:.|:..|     
Zfish   401 AYAWPFYKPVDVSSLGLHDYYDIIMYPMDLSTIKRKMDHREYRDALQ--FAADVRLMFSN----- 458

  Fly   354 MAVSIESSDDEAIDASMRITDADRCATQKLFAKLPTNAMKEIIHMVQQIEGFSSENCGDLSFDVK 418
             .......|.:.:..:.|:.|    ..:..|||:|.          :.:|.....:.|.      
Zfish   459 -CYKYNPPDHDVVAMARRLQD----VFEFRFAKMPD----------EPLESLPPASLGG------ 502

  Fly   419 GLATDTMIMMKSAVTKATRAHSKLKLKDMQPSEKEGLQRA-----LQSQLVNITRMLNK------ 472
            ||..|:.....|:.:.:....|.....:..||.....:||     ||.|:....|.:::      
Zfish   503 GLGGDSSSSSSSSSSSSESDVSSESESESSPSSDSEEERAHRLAQLQEQVCTQLRAVHEQLAALS 567

  Fly   473 ---------------NRRRCGPLINFRNKNNTANNVVRKRATAPLTAKLKPLQANVMAPQLGAGV 522
                           .:::..|..:.|:::...:.||.:.|..|...|....::|..|.......
Zfish   568 STPIIKPKKKKEKKDKKKKKKPEKHKRSRSVIEDEVVMRPAKIPKLPKTPKSRSNSKAATSTQSK 632

  Fly   523 VETHNLSDTSDDDVSA-----PVKLSAIGGTP-------------------MRNLPIN------- 556
            ..::..|:.|.....|     |..||..|.||                   ..:|.||       
Zfish   633 KSSNKKSNKSKSSKKAQPTFFPPPLSHSGLTPHYDSEEEEETSPMSYDEKRQLSLDINRLPGEKL 697

  Fly   557 ----------------SNPLQ--------------------MQPIRSPPKLPHVV---------- 575
                            :||.:                    |..:|..|:.|.|.          
Zfish   698 GRVVHIIQSREPSLRDTNPEEIEIDFETLKPSTLRELERYVMMCLRKKPRKPFVAIKGSAGKSRE 762

  Fly   576 ELQMSSSSSSESEMKSKSGRLSR----SRSRSMSDTKLRPRSNSSASSRSNSSSSSGSNAGSSSG 636
            ||.:......|..::..||:|:.    .::::...:.:.|.:.:|..|.|:|||.|         
Zfish   763 ELALEKKRELERRLQDVSGQLNSVKKPQKTKAEKPSAVEPHAVASRLSASSSSSDS--------- 818

  Fly   637 SRSRSSSSSSSSSNNSSESN 656
                |||||||||:::|||:
Zfish   819 ----SSSSSSSSSSDTSESD 834

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tbrd-2NP_611401.2 Bromo_gcn5_like 34..136 CDD:99941 40/101 (40%)
brd2aNP_571275.2 Bromo_Brdt_I_like 72..178 CDD:99929 43/105 (41%)
Bromo_Brdt_II_like 383..484 CDD:99930 16/112 (14%)
BET 676..738 CDD:293640 5/61 (8%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5076
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 149 1.000 Inparanoid score I4352
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
32.910

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