DRSC/TRiP Functional Genomics Resources

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Protein Alignment tbrd-2 and sepa-1

DIOPT Version :9

Sequence 1:NP_611401.2 Gene:tbrd-2 / 37207 FlyBaseID:FBgn0034423 Length:674 Species:Drosophila melanogaster
Sequence 2:NP_493339.1 Gene:sepa-1 / 173196 WormBaseID:WBGene00010808 Length:702 Species:Caenorhabditis elegans


Alignment Length:604 Identity:113/604 - (18%)
Similarity:209/604 - (34%) Gaps:165/604 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    57 EPVDTEALMVPTYYTVIHRPMDIGTIVKRVQNNYYKSVNEAIADFKQIISNCFLFNRSGDVVYRK 121
            :|:.||..:.| ||.|....::  ..|....|.....:.:.|..||   ::||:.....::.|..
 Worm    61 QPILTEKHISP-YYAVYSDLLE--DFVLFGYNTMTGKMEQFIYAFK---TDCFVEVNRPEIKYNP 119

  Fly   122 GQMLEKFFHKKLRGMPSGPEVPCNRDPKAVGRPRTNAPSSAQTERKCRELLKK------------ 174
            ..:::......|.| |.|..|...||                    ||.||.|            
 Worm   120 AFLVKGNVVVALNG-PEGELVVIERD--------------------CRGLLSKESTSYGQFRTLP 163

  Fly   175 ---LQSITNQTDAMTRNFFSNKWD-----------SLQKKVDR---QYFKSVNEF----CLHVDG 218
               |:::|.|      :...::||           |..:..||   :|.|::..|    |||::.
 Worm   164 TAALRTLTLQ------DLERDRWDRAANSDEVKISSGNESFDRLYAEYQKNLPRFQVRQCLHLNK 222

  Fly   219 CFRKYHEPAKILYERV--------FNQ-PAAWCTSMNGNSSLESALNAADLNELLAAAKLTVNSL 274
            .|...:......|.|:        |.: ....||.....|:|.......:.:||:.....|.|:.
 Worm   223 EFLCVYSKTSGDYTRLEYIDETGDFQKISCTLCTCEVTESNLIPLYVERNASELVIHVHNTENNQ 287

  Fly   275 MQ----------CVQMPGS--GEPLTAKSLVETF-CDTLNK----MINKMEAGQRNSPNPSSSKR 322
            ::          .||:..:  .:|....|.:..| .:.::.    ||.:...|:.......|...
 Worm   288 IEQYIYDVRTFGFVQVKRNLVYDPKKITSGLNLFMAENIDNRKVYMIMRGRDGRLQKETSGSGGF 352

  Fly   323 QKMSP-----------EQETDLVQGEFKPAMELLSGNEIDNLMAVSIESSDDEAIDASMRITDAD 376
            :||.|           |.:|:.   |.|.|    |...::....|..|..|  .::..:.:.::.
 Worm   353 EKMQPVAVKTFQVQWVEMKTEF---EKKKA----STERVEPQHPVQTEGED--IMETVLAMVESF 408

  Fly   377 RCATQKLFAKLPTNAMKEIIHMVQQIEGFSSE-----------------------NCGDLSFDVK 418
            .|..:|   :|.....:||.....::|...:|                       :.|..::..:
 Worm   409 NCDLRK---ELGLTQDQEIPRKAPRVESAETEENIVKNLEKLQIAKDPEEPTTAASEGGNTYGYQ 470

  Fly   419 GLATDTM---IMMKSAVTKATRAHSKLKLK------DMQPSEKEGLQRALQSQLVNITRMLNKNR 474
            .| .|||   ::.|.|.:|...|:....:|      |:...:|:..:|.|:|:|..|...:::..
 Worm   471 EL-DDTMSEGLLEKEAESKHQDANEPEPVKNVTYEPDVAAMDKKKKRRELKSRLNKINAQIDELE 534

  Fly   475 RRCGPLINFRNKNNTANNVVRKRATAPLTAKLKPLQA-------NVMAPQLGAGVVETHNLS--- 529
            :|   .:....|....::.|.....|.:.|...|..|       |...|::  .:.|.:|.|   
 Worm   535 KR---RMERAGKKQVVSSSVPSEEAAQVEAPASPALAENTNQISNEETPKI--DIFEGYNGSFLF 594

  Fly   530 --DTSDDDVSAPVKLSAIG 546
              :||.:.:...::...:|
 Worm   595 GTNTSKEWIVEDIRNHMVG 613

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tbrd-2NP_611401.2 Bromo_gcn5_like 34..136 CDD:99941 16/78 (21%)
sepa-1NP_493339.1 KIX 600..676 CDD:280354 1/14 (7%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5076
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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