DRSC/TRiP Functional Genomics Resources

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Protein Alignment cora and HPF1

DIOPT Version :9

Sequence 1:NP_523791.2 Gene:cora / 37205 FlyBaseID:FBgn0010434 Length:1698 Species:Drosophila melanogaster
Sequence 2:NP_014487.1 Gene:HPF1 / 854010 SGDID:S000005515 Length:967 Species:Saccharomyces cerevisiae


Alignment Length:1285 Identity:238/1285 - (18%)
Similarity:401/1285 - (31%) Gaps:425/1285 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   449 KAALAAGAAAGAAVNGNDELNDSNKSDKSSGRRGVGIFSSGRKSKSGSPSKDGKDKSGKDKDKEV 513
            :||||....:.:|: |....|.|:.:..||  ..|...|||..|.|.|                 
Yeast     9 QAALALVLYSQSAL-GQYYTNSSSIASNSS--TAVSSTSSGSVSISSS----------------- 53

  Fly   514 GRLGLVVTSGLGDNQQDQNLDEAARNAAKNRGSTTPGV-TRQYEYAVDNDGNTSPTRKSYTPGGF 577
                :.:||...|  ...:|.|...::.:...|..|.. :.:...::.:.|::.....|.|..|.
Yeast    54 ----IELTSSTSD--VSSSLTELTSSSTEVSSSIAPSTSSSEVSSSITSSGSSVSGSSSITSSGS 112

  Fly   578 RYDQDPNSRKSGADGQEQLSPTSQQKKI-GLAFNYAPGNENALKETAEKLKAGQLSPRTQDKLNR 641
            ......::.:||:......|.|.....: |.:.:...|:.:|       .::|.....:......
Yeast   113 SVSSSSSATESGSSASGSSSATESGSSVSGSSTSITSGSSSA-------TESGSSVSGSTSATES 170

  Fly   642 GQLSPKSRAKLLQDPLLSPTTRAKLQGSAVDAAAVPLSDSQKRSYSPTKGPQGYSSGAPGSYKPI 706
            |..:..|.:........|.::.|...||:|..::.........|.|.:....|.:|..|.|...:
Yeast   171 GSSASGSSSATESGSSASGSSSATESGSSVSGSSSATESGSSVSGSSSATESGSASSVPSSSGSV 235

  Fly   707 SDPTADFLESQRYNKEPGYVGPSKADVAAGLAGAAGSKKPGSPTKTGKGAPGAAAAAAAGAAGAA 771
            ::..:....|:           |....:...:|::.|...||.|::|....|::|::|.|     
Yeast   236 TESGSSSSASE-----------SSITQSGTASGSSASSTSGSVTQSGSSVSGSSASSAPG----- 284

  Fly   772 AAAAKPKKRRVKIMVITSKFDPSTKRIDAENGSIEHSTGILDPATGLIDTKYGVIDPKKGTLEAL 836
                           |:|....||......:|||  ::|.|...|.         .....|..|.
Yeast   285 ---------------ISSSIPQSTSSASTASGSI--TSGTLSSITS---------SASSATATAS 323

  Fly   837 NTKTGKKEVFQGDVDGKTGNLHLVSGVADPKTGRLDDTLGQIVCITPQDNPVVELTVITSRIDPA 901
            |:           :....|.::|                                        |:
Yeast   324 NS-----------LSSSDGTIYL----------------------------------------PS 337

  Fly   902 TGKIDTVNGDVERSLGVLNLDTGLLDTKYGEINTRTGELKAIDPKSGKIVVSKNVKVDPGTGQIT 966
            |    |::||:                      |.|          |.::.::.|:|..| |::|
Yeast   338 T----TISGDI----------------------TLT----------GSVIATEAVEVAAG-GKLT 365

  Fly   967 IL---------------GIVDPKTNKIDPNQGRLIEVGQQIDPIVEVTSLAGKFDSKRNIIDPKT 1016
            :|               |:...|:....|        |.:.|...|...::|.|:::      :.
Yeast   366 LLDGDKYVFSADFIIHGGVFVEKSKPTYP--------GTEFDISGENFDVSGTFNAE------EP 416

  Fly  1017 AQVETSGGQFDPKAGKIDTKYGQIDLVKHTITFNDPKSGKTVTRDIKI---EPTTGQIVLKNQVN 1078
            |....|...|.|         |..|           .||     ||.:   |.|.|::..    :
Yeast   417 AASSASAYSFTP---------GSFD-----------NSG-----DISLSLSESTKGEVTF----S 452

  Fly  1079 PKNNKPDKDYARII----SLRIVQQRVDPATKAPITEVSASKDKDIVVDPKSNQIWVPTGATDPA 1139
            |.:|.....::..|    |:..:|:|.:..:                  ..:.:|.:..|:|   
Yeast   453 PYSNSGAFSFSNAILNGGSVSGLQRRAESGS------------------VNNGEINLENGST--- 496

  Fly  1140 TKEQQYISSSVDPKTGYVITIYGYLDPKTNEIKKQTKLDPNTIKIEPTSGKIY-----TATGEVD 1199
                 |:  .|:|.:|                       ..||.|  .||.:|     |.||:..
Yeast   497 -----YV--VVEPVSG-----------------------SGTINI--ISGNLYLHYPDTFTGQTV 529

  Fly  1200 QATGEPLYAATQVDPESGEVYTKLARVDPKTGKIVIVRILLISKTDERGRPEEIDPSTCEIDPVS 1264
            ...||.:.|   |||           .:..|..|.:|     ..|.|.......|.:....|..:
Yeast   530 VFKGEGVLA---VDP-----------TETNTTPIPVV-----GYTGENQIAITADVTALSYDSAT 575

  Fly  1265 GRVLKFFNKTVYVYNMIDPVTGEIVQVDPNDPRFAGA-------------RTTVTHTMTLTGEID 1316
            |.:......:.:.:::....:.....|  ::..||||             ..|.:.|.|.:|..:
Yeast   576 GVLTATQGNSQFSFSIGTGFSSSGFNV--SEGTFAGAYAYYLNYGGVVASSATPSSTSTTSGATN 638

  Fly  1317 PVTGRIKSEYGDIDPNTGDIDPATAVTD---PVTGKLILNYAQIDPSHFGKQAQVQTTTETVPIT 1378
            ..:|  .:.:|      ..:..:||.|.   .|||..........||.:.......|||.||.::
Yeast   639 STSG--STSFG------ASVTGSTASTSFGASVTGSTASTLISGSPSVYTTTLTYATTTSTVVVS 695

  Fly  1379 RQQFFDGVKHISKGALRRDSEGSSDDDMTAQYGADQVNEILIGSPAGQAGGKLGKPVSTPTVVKT 1443
            ..:             ..||.|:             |..|....|.......:.....|...|.|
Yeast   696 CSE-------------TTDSNGN-------------VYTITTTVPCSSTTATITSCDETGCHVTT 734

  Fly  1444 TTKQVLTKNIDG-------VTHNVEEEVRNLGTGEVTYSTQEHKADATPTDLSGAYVTATAVTTR 1501
            :|..|.|:.:..       |||     ..|.|....|.:::      .|.:.|....:..:.||.
Yeast   735 STGTVATETVSSKSYTTVTVTH-----CDNNGCNTKTVTSE------CPEETSATTTSPKSYTTV 788

  Fly  1502 TATTHEDLGKNAKTEQLEEKTVATTRTHDPNKQQQRVVTQEVKTTATVTSGDQYQRRDSVSSTSS 1566
            |.|..:|.|.|.||...|.....||           .|:.:..||||||..|     |:..||.:
Yeast   789 TVTHCDDNGCNTKTVTSEAPEATTT-----------TVSPKTYTTATVTQCD-----DNGCSTKT 837

  Fly  1567 GDSGTPIDGPYDGASVVRTDNQKSPLFTTSATTGPHVESTRVVLGEDTPGFSGHGEIISTQTVSS 1631
            ..|..|                |....|:..:..|...:|..|...|..|.  :.:||::| :..
Yeast   838 VTSEAP----------------KETSETSETSAAPKTYTTATVTQCDDNGC--NVKIITSQ-IPE 883

  Fly  1632 KTRTVETITYKTERDGIVETRVEQKITIQSDGDPIDHDKALAEAIQEATA 1681
            .|.|| |.|..:.:         ...|:.|:|...   .:|..||.:|::
Yeast   884 ATSTV-TATSASPK---------SYTTVTSEGSKA---TSLTTAISKASS 920

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
coraNP_523791.2 B41 34..224 CDD:214604
FERM_N 36..98 CDD:286467
FERM_M 116..224 CDD:278785
FERM_C_4_1_family 219..312 CDD:270005
FA 323..363 CDD:285894
PQQ_2 829..>972 CDD:290097 20/157 (13%)
4_1_CTD 1612..1698 CDD:283537 17/70 (24%)
HPF1NP_014487.1 Hyphal_reg_CWP 337..617 CDD:403079 75/433 (17%)
Herpes_BLLF1 <643..937 CDD:282904 81/369 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23280
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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