DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment cora and FRMD5

DIOPT Version :9

Sequence 1:NP_523791.2 Gene:cora / 37205 FlyBaseID:FBgn0010434 Length:1698 Species:Drosophila melanogaster
Sequence 2:NP_116281.2 Gene:FRMD5 / 84978 HGNCID:28214 Length:570 Species:Homo sapiens


Alignment Length:400 Identity:134/400 - (33%)
Similarity:210/400 - (52%) Gaps:22/400 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 SSSSHGKPALARVTLLDGSLLDVSIDRKAIGRDVINSICAGLNLIEKDYFGLTYETPTDPRTWLD 88
            ||.|..:.....|.|||.|....:|.|.|.|:.:.:.:|..|||:||||||:.:..|...|.||:
Human     9 SSRSLEREYSCTVRLLDDSEYTCTIQRDAKGQYLFDLLCHHLNLLEKDYFGIRFVDPDKQRHWLE 73

  Fly    89 LEKPVSKFFRTDTWPLT--FAVKFYPPEPSQLKEDITRYHLCLQVRNDILEGRLPCTFVTHALLG 151
            ..|.|.|..|:.. |.|  |.|||||.:|:.|||:||||.:.||::.|:..|||.|.....|||.
Human    74 FTKSVVKQLRSQP-PFTMCFRVKFYPADPAALKEEITRYLVFLQIKRDLYHGRLLCKTSDAALLA 137

  Fly   152 SYLVQSEMGDYDAEEMPTRAYLKDFKIAPNQTAELEDKVMDLHKTH-KGQSPAEAELHYLENAKK 215
            :|::|:|:||||:.:.| ..|...|:..|..:.:||.|:.::|||. .||:||.:||::|..|:.
Human   138 AYILQAEIGDYDSGKHP-EGYSSKFQFFPKHSEKLERKIAEIHKTELSGQTPATSELNFLRKAQT 201

  Fly   216 LAMYGVDLHPAKDSEGVDIMLGVCASGLLVYRDKLRINRFAWPKILKISYKRHHFYIKIRPGEFE 280
            |..||||.||.||..|....|.....|.:|.:...|::...|.::.|:.::...||:.:  .:.|
Human   202 LETYGVDPHPCKDVSGNAAFLAFTPFGFVVLQGNKRVHFIKWNEVTKLKFEGKTFYLYV--SQKE 264

  Fly   281 QYESTIGFKLANHRAAKKLWKSCVEHHTFFRL---MTPEPVSKSKMFPVFGSTYRYKGRTQAE-- 340
            :.:..:.:......|.|.|||..:|:..|::|   .....||.|.:| ..||.:||.||...|  
Human   265 EKKIILTYFAPTPEACKHLWKCGIENQAFYKLEKSSQVRTVSSSNLF-FKGSRFRYSGRVAKEVM 328

  Fly   341 STNTPVDRTPPKFNRTLSGARLTSRSMDALA----LAEKEKVARKSSTLD-HRGDRNADGDAHSR 400
            .::..:.|.||:.:|   ...:.|||..::.    |:...:..|::..:. ..|..:....||| 
Human   329 ESSAKIKREPPEIHR---AGMVPSRSCPSITHGPRLSSVPRTRRRAVHISIMEGLESLRDSAHS- 389

  Fly   401 SPIKNKKEKD 410
            :|:::....|
Human   390 TPVRSTSHGD 399

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
coraNP_523791.2 B41 34..224 CDD:214604 83/192 (43%)
FERM_N 36..98 CDD:286467 26/61 (43%)
FERM_M 116..224 CDD:278785 47/108 (44%)
FERM_C_4_1_family 219..312 CDD:270005 25/92 (27%)
FA 323..363 CDD:285894 12/41 (29%)
PQQ_2 829..>972 CDD:290097
4_1_CTD 1612..1698 CDD:283537
FRMD5NP_116281.2 B41 19..210 CDD:214604 83/192 (43%)
FERM_C_FRMD3_FRMD5 191..295 CDD:270013 30/105 (29%)
Interaction with ROCK1. /evidence=ECO:0000269|PubMed:25448675 308..353 16/48 (33%)
FA 309..354 CDD:370090 15/48 (31%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 344..367 4/22 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 385..407 4/15 (27%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165151651
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3530
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
43.740

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