DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment cora and epb41l5

DIOPT Version :9

Sequence 1:NP_523791.2 Gene:cora / 37205 FlyBaseID:FBgn0010434 Length:1698 Species:Drosophila melanogaster
Sequence 2:NP_956383.1 Gene:epb41l5 / 368449 ZFINID:ZDB-GENE-030616-450 Length:772 Species:Danio rerio


Alignment Length:811 Identity:198/811 - (24%)
Similarity:333/811 - (41%) Gaps:195/811 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 AEIKPSAPAEPETPTKSKPKSSSSSHGKPALARVTLLDGSLLDVSIDRKAIGRDVINSICAGLNL 67
            |.::.:..|....|.....||..:       .||:||||:.:.|.:.:||.|.::...|...|::
Zfish    21 ARLREAQRATTHIPAAGDAKSIIT-------CRVSLLDGTDVSVDLPKKAKGAELFEQIMYHLDV 78

  Fly    68 IEKDYFGLTYETPTDPRTWLDLEKPVSKFFRT-DTWPLTFAVKFYPPEPSQLKEDITRYHLCLQV 131
            :|||||||.:........|||:.|.:.|..:. ..:.|...||||..||:.|.|::|||...||:
Zfish    79 VEKDYFGLRFMDSAQVPHWLDVTKSIKKQVKIGPPYCLHMRVKFYSSEPNNLHEELTRYLFVLQL 143

  Fly   132 RNDILEGRLPCTFVTHALLGSYLVQSEMGDYDAEEMPTRAYLKDFKIAPNQTAELEDKVMDLHKT 196
            :.|||.|:|.|.|.|...|.||.:|:|:||||..|... ..:.:|:..||||.::|..:.:..|.
Zfish   144 KQDILSGKLECPFDTTVELASYALQAELGDYDPAEHGL-DLVSEFRFIPNQTEDMEVAIYNAWKE 207

  Fly   197 HKGQSPAEAELHYLENAKKLAMYGVDLHPAKDSEGVDIMLGVCASGLLVYRDKLRINRFAWPKIL 261
            .:||:||:||::||..||.|.|||||:|..|..:|.:..||:..:|:||:..:.:|..|.||||.
Zfish   208 CRGQTPAQAEINYLNKAKWLEMYGVDMHMVKARDGNEYSLGLTPTGVLVFEGETKIGLFFWPKIT 272

  Fly   262 KISYKRHHFYIKI---------RPGEFEQYESTIGFKLANHRAAKKLWKSCVEHHTFFRLMTPEP 317
            ::.:|:....:.:         ...|.::.|.|..|::.:.:|.|.|||..||||.||||..|..
Zfish   273 RLDFKKCKLTLVVVEDDEQVMQETEEGKEQEHTFVFRMDHPKACKHLWKCAVEHHAFFRLRGPVQ 337

  Fly   318 VSKSKM-FPVFGSTYRYKGRTQAESTNTPVDRTPPKFNRTLSGARLTSRSMDALALAEKEKVARK 381
            .|.::. |...||.:||.|:|:.::|                                |...||:
Zfish   338 KSSARSGFIRMGSRFRYSGKTEYQTT--------------------------------KANKARR 370

  Fly   382 SSTLDHRGDRNADGDAHSRSPIKNK-KEKDADKEAKLREKKQKEKEEKERKEREKRELEEKKKAE 445
            |::.:.|..|.     :||..:.|: ..|.:|                                 
Zfish   371 SASFERRPSRR-----YSRRTMLNRGPNKSSD--------------------------------- 397

  Fly   446 KAAKAALAAGAAAGAAVNGNDELNDSNKSDKSSGR---RGVGIFSSGRKSKSGSPSKDG------ 501
                             |.|:.::.|.:...:..|   .|:.:.||       .||..|      
Zfish   398 -----------------NHNNGVSPSIEKKPTHTRPPWSGMPVVSS-------PPSAPGPMEIET 438

  Fly   502 --KDKSGKDKDKEVGRLGLVVTSGLGDNQQDQ---------NLDEAARNAAKNRGST-------- 547
              :...|...||.    .:.:.:.|.:...|:         .::||...||....|:        
Zfish   439 LPRSPGGSQSDKR----SMPIVTDLLETCVDEVLQATVPMATVEEAGPGAAHTSASSVTEETLSL 499

  Fly   548 TPGVTRQYEYAVDNDGNTSPTRKSYTPGGFRYD----------------------QDPNSRKSG- 589
            |....|..:..::|...:.|.|.:........|                      :.|:..||. 
Zfish   500 TEAAARLKQLEIENTPVSVPARTNVNLNMNNQDDVVKLTEKSLNSVSSSPVLNQLKAPDELKSNI 564

  Fly   590 ADGQEQLSPTSQQKKIGLAFNYAPGNENALKETAEKL--KAGQLSPRTQDKLNRGQLSPKSRAKL 652
            ...|.:.:....:.::||    .|.....|:|.|.:|  :.|::...|...:: |:...:....:
Zfish   565 LKAQAEAALKDSRDELGL----TPDKNCNLQEAAARLTGRGGRMGSTTSLPVS-GRAERQESWDM 624

  Fly   653 LQDPLLSPTTRAKLQGSAVD--AAAVPL-SDSQKRSYS---PTKGPQGYSSGAPGSYKPISDPTA 711
            |:.|.|.|::.:.|:..|.|  ::..|| ||....::|   ..:.|:..::       |::|...
Zfish   625 LKQPGLLPSSTSSLEEKADDFISSVPPLSSDPVNEAHSSKVKVEDPEPLTA-------PLTDNLI 682

  Fly   712 DFLE------SQRYNKEPGYVGPSKADVAAG 736
            ||.:      ..:....|.::.|:.|...:|
Zfish   683 DFTDPLPVVPPPKPTITPRWIIPASAPTQSG 713

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
coraNP_523791.2 B41 34..224 CDD:214604 79/190 (42%)
FERM_N 36..98 CDD:286467 23/61 (38%)
FERM_M 116..224 CDD:278785 48/107 (45%)
FERM_C_4_1_family 219..312 CDD:270005 34/101 (34%)
FA 323..363 CDD:285894 8/40 (20%)
PQQ_2 829..>972 CDD:290097
4_1_CTD 1612..1698 CDD:283537
epb41l5NP_956383.1 B41 44..235 CDD:214604 79/198 (40%)
FERM_N 47..109 CDD:286467 23/61 (38%)
FERM_B-lobe 135..227 CDD:271216 40/92 (43%)
FERM_C_NBL4_NBL5 231..331 CDD:270007 32/99 (32%)
FA 344..>375 CDD:285894 12/62 (19%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.910

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