DRSC/TRiP Functional Genomics Resources

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Protein Alignment cora and FRMD6

DIOPT Version :10

Sequence 1:NP_523791.2 Gene:cora / 37205 FlyBaseID:FBgn0010434 Length:1698 Species:Drosophila melanogaster
Sequence 2:NP_001253975.1 Gene:FRMD6 / 122786 HGNCID:19839 Length:622 Species:Homo sapiens


Alignment Length:649 Identity:105/649 - (16%)
Similarity:219/649 - (33%) Gaps:206/649 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 LDVSIDRKAIGRDVINSICAGLNLIEKDYFGLTYETPTD--------------PRTWLDLEKPVS 94
            |::.|:.|.:...::..:|..|.|.:...|||:.....:              |:.|   :|..|
Human    28 LNIIINVKILCHQLLVQVCDLLRLKDCHLFGLSVIQNNEHVYMELSQKLYKYCPKEW---KKEAS 89

  Fly    95 KFFRTD-TWPLT---------FAVKFYPPEPSQLKEDITRYHLCLQVRNDILEGRLPCTFVTHAL 149
            |..:.: ||.:.         |.|::|......:.:...||:....:|..:|..:.......:.|
Human    90 KVRQYEVTWGIDQFGPPMIIHFRVQYYVENGRLISDRAARYYYYWHLRKQVLHSQCVLREEAYFL 154

  Fly   150 LGSYLVQSEMGDYDAEE-----MPTRAYLKDFKIAPNQTAELEDKVMDLHKTHKGQSPAEAELHY 209
            |.::.:|:::|::...:     ....||...:.::......:...:.::||.....:.:||.|.|
Human   155 LAAFALQADLGNFKRNKHYGKYFEPEAYFPSWVVSKRGKDYILKHIPNMHKDQFALTASEAHLKY 219

  Fly   210 LENAKKL---AMYGVDLHPAKDSEGVDIMLGVCASGLLVYR----DKLRINRFAWPKILKISYKR 267
            ::.|.:|   |::...|:..|......:.||:...|:.:::    :|..:..|.|..:.|:.:..
Human   220 IKEAVRLDDVAVHYYRLYKDKREIEASLTLGLTMRGIQIFQNLDEEKQLLYDFPWTNVGKLVFVG 284

  Fly   268 HHFYIKIRPGEFEQYESTIGFKLANHRAAKKL--WKSCVEHHTFFRLMTPEPVSKSKMFPVFGST 330
            ..|  :|.|....              :|:||  :..|             |:....:..:..::
Human   285 KKF--EILPDGLP--------------SARKLIYYTGC-------------PMRSRHLLQLLSNS 320

  Fly   331 YRYKGRTQAESTNTPVDRTPPKFNRTLSGARLTSRSMDALALAEKEKVARKSSTLDHRGDRNADG 395
            :|.....|      ||.|                                               
Human   321 HRLYMNLQ------PVLR----------------------------------------------- 332

  Fly   396 DAHSRSPIKNKKEKDADKEAKLREKKQKEKEEKERKEREKRELEEKKKAEKAAKAALAAGAAA-G 459
              |.|. ::..:||...:|:.:.:....:.::.|::.|.........|.::.::.:.|:.::: .
Human   333 --HIRK-LEENEEKKQYRESYISDNLDLDMDQLEKRSRASGSSAGSMKHKRLSRHSTASHSSSHT 394

  Fly   460 AAVNGNDELNDSNKSDKSSGRRGVGIFSSG--RKSKS-------GSPSKDGKDKSGKDK------ 509
            :.:..:.:..|:...|..|        ||.  ||.|:       ||....|.:..|||:      
Human   395 SGIEADTKPRDTGPEDSYS--------SSAIHRKLKTCSSMTSHGSSHTSGVESGGKDRLEEDLQ 451

  Fly   510 DKEVGRL-------------GLVVT--------------------SGLGDNQQDQNLDEAARNAA 541
            |.|:..|             .|.|:                    |||...:...:...::....
Human   452 DDEIEMLVDDPRDLEQMNEESLEVSPDMCIYITEDMLMSRKLNGHSGLIVKEIGSSTSSSSETVV 516

  Fly   542 KNRGSTTPGV-----------TRQYEYAVDN-----------DGNTSPTRKSYTPG-GFRYDQD 582
            |.||.:|..:           |.::..::|:           .|....|.:|||.| |...|::
Human   517 KLRGQSTDSLPQTICRKPKTSTDRHSLSLDDIRLYQKDFLRIAGLCQDTAQSYTFGCGHELDEE 580

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
coraNP_523791.2 B41 34..224 CDD:214604 38/211 (18%)
FERM_C_4_1_family 219..312 CDD:270005 16/98 (16%)
FA 324..364 CDD:462582 5/39 (13%)
4_1_CTD 1613..1698 CDD:461774
FRMD6NP_001253975.1 FERM_F1_FRMD6 15..120 CDD:340718 19/94 (20%)
FERM_M 118..234 CDD:459788 19/115 (17%)
FERM_C_FRMD1_FRMD6 227..335 CDD:270006 24/191 (13%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 364..445 16/88 (18%)
Blue background indicates that the domain is not in the aligned region.

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