DRSC/TRiP Functional Genomics Resources

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Protein Alignment cora and FRMD6

DIOPT Version :9

Sequence 1:NP_523791.2 Gene:cora / 37205 FlyBaseID:FBgn0010434 Length:1698 Species:Drosophila melanogaster
Sequence 2:NP_001253975.1 Gene:FRMD6 / 122786 HGNCID:19839 Length:622 Species:Homo sapiens


Alignment Length:649 Identity:105/649 - (16%)
Similarity:219/649 - (33%) Gaps:206/649 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 LDVSIDRKAIGRDVINSICAGLNLIEKDYFGLTYETPTD--------------PRTWLDLEKPVS 94
            |::.|:.|.:...::..:|..|.|.:...|||:.....:              |:.|   :|..|
Human    28 LNIIINVKILCHQLLVQVCDLLRLKDCHLFGLSVIQNNEHVYMELSQKLYKYCPKEW---KKEAS 89

  Fly    95 KFFRTD-TWPLT---------FAVKFYPPEPSQLKEDITRYHLCLQVRNDILEGRLPCTFVTHAL 149
            |..:.: ||.:.         |.|::|......:.:...||:....:|..:|..:.......:.|
Human    90 KVRQYEVTWGIDQFGPPMIIHFRVQYYVENGRLISDRAARYYYYWHLRKQVLHSQCVLREEAYFL 154

  Fly   150 LGSYLVQSEMGDYDAEE-----MPTRAYLKDFKIAPNQTAELEDKVMDLHKTHKGQSPAEAELHY 209
            |.::.:|:::|::...:     ....||...:.::......:...:.::||.....:.:||.|.|
Human   155 LAAFALQADLGNFKRNKHYGKYFEPEAYFPSWVVSKRGKDYILKHIPNMHKDQFALTASEAHLKY 219

  Fly   210 LENAKKL---AMYGVDLHPAKDSEGVDIMLGVCASGLLVYR----DKLRINRFAWPKILKISYKR 267
            ::.|.:|   |::...|:..|......:.||:...|:.:::    :|..:..|.|..:.|:.:..
Human   220 IKEAVRLDDVAVHYYRLYKDKREIEASLTLGLTMRGIQIFQNLDEEKQLLYDFPWTNVGKLVFVG 284

  Fly   268 HHFYIKIRPGEFEQYESTIGFKLANHRAAKKL--WKSCVEHHTFFRLMTPEPVSKSKMFPVFGST 330
            ..|  :|.|....              :|:||  :..|             |:....:..:..::
Human   285 KKF--EILPDGLP--------------SARKLIYYTGC-------------PMRSRHLLQLLSNS 320

  Fly   331 YRYKGRTQAESTNTPVDRTPPKFNRTLSGARLTSRSMDALALAEKEKVARKSSTLDHRGDRNADG 395
            :|.....|      ||.|                                               
Human   321 HRLYMNLQ------PVLR----------------------------------------------- 332

  Fly   396 DAHSRSPIKNKKEKDADKEAKLREKKQKEKEEKERKEREKRELEEKKKAEKAAKAALAAGAAA-G 459
              |.|. ::..:||...:|:.:.:....:.::.|::.|.........|.::.::.:.|:.::: .
Human   333 --HIRK-LEENEEKKQYRESYISDNLDLDMDQLEKRSRASGSSAGSMKHKRLSRHSTASHSSSHT 394

  Fly   460 AAVNGNDELNDSNKSDKSSGRRGVGIFSSG--RKSKS-------GSPSKDGKDKSGKDK------ 509
            :.:..:.:..|:...|..|        ||.  ||.|:       ||....|.:..|||:      
Human   395 SGIEADTKPRDTGPEDSYS--------SSAIHRKLKTCSSMTSHGSSHTSGVESGGKDRLEEDLQ 451

  Fly   510 DKEVGRL-------------GLVVT--------------------SGLGDNQQDQNLDEAARNAA 541
            |.|:..|             .|.|:                    |||...:...:...::....
Human   452 DDEIEMLVDDPRDLEQMNEESLEVSPDMCIYITEDMLMSRKLNGHSGLIVKEIGSSTSSSSETVV 516

  Fly   542 KNRGSTTPGV-----------TRQYEYAVDN-----------DGNTSPTRKSYTPG-GFRYDQD 582
            |.||.:|..:           |.::..::|:           .|....|.:|||.| |...|::
Human   517 KLRGQSTDSLPQTICRKPKTSTDRHSLSLDDIRLYQKDFLRIAGLCQDTAQSYTFGCGHELDEE 580

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
coraNP_523791.2 B41 34..224 CDD:214604 38/211 (18%)
FERM_N 36..98 CDD:286467 14/67 (21%)
FERM_M 116..224 CDD:278785 19/115 (17%)
FERM_C_4_1_family 219..312 CDD:270005 16/98 (16%)
FA 323..363 CDD:285894 5/39 (13%)
PQQ_2 829..>972 CDD:290097
4_1_CTD 1612..1698 CDD:283537
FRMD6NP_001253975.1 FERM_F1_FRMD6 15..120 CDD:340718 19/94 (20%)
FERM_B-lobe 128..226 CDD:271216 17/97 (18%)
FERM_C_FRMD1_FRMD6 227..335 CDD:270006 24/191 (13%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 364..445 16/88 (18%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165151663
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.840

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