DRSC/TRiP Functional Genomics Resources

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Protein Alignment cora and wu:fi46h04

DIOPT Version :10

Sequence 1:NP_523791.2 Gene:cora / 37205 FlyBaseID:FBgn0010434 Length:1698 Species:Drosophila melanogaster
Sequence 2:XP_073790072.1 Gene:wu:fi46h04 / 100329282 ZFINID:ZDB-GENE-030131-6324 Length:1072 Species:Danio rerio


Alignment Length:935 Identity:313/935 - (33%)
Similarity:446/935 - (47%) Gaps:188/935 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 EIKPSAPAEPETPTKS---KPKSSS-------SSHGKPALARVTLLDGSLLDVSIDRKAIGRDVI 58
            |:|.|...:.|...:.   :|:.|:       |...|..:..|||||||.....::::|.|:.:.
Zfish   200 EVKESEEKKEEKKEQEQVIQPEESAALLPHKLSKKMKMVVCHVTLLDGSQFSCEVEKRAKGQYLF 264

  Fly    59 NSICAGLNLIEKDYFGLTYETPTDPRTWLDLEKPVSKFFRTDTWPLTFAVKFYPPEPSQLKEDIT 123
            ..:|..|||:|||||.|:::...:.|.|||..|.:.:..|...|...|:||||||:||||.||:|
Zfish   265 FEVCEHLNLVEKDYFALSFKDNAEQRCWLDPTKEIKRQIRNSQWQFAFSVKFYPPDPSQLTEDLT 329

  Fly   124 RYHLCLQVRNDILEGRLPCTFVTHALLGSYLVQSEMGDYDAEEMPTRAYLKDFKIAPNQTAELED 188
            ||.||||:|.||..|||||:||||||||||.:|:|:||.|.:| ....|:.||:.|||||.|||:
Zfish   330 RYLLCLQLRQDIASGRLPCSFVTHALLGSYALQAELGDQDPDE-HRLDYISDFQFAPNQTKELEE 393

  Fly   189 KVMDLHKTHKGQSPAEAELHYLENAKKLAMYGVDLHPAKDSEGVDIMLGVCASGLLVYRDKLRIN 253
            |||:|||:|:|.:||:|:..:|||||||:|||||||.|||||||||||||||:|||:|:|:||||
Zfish   394 KVMELHKSHRGMTPAQADAQFLENAKKLSMYGVDLHHAKDSEGVDIMLGVCANGLLIYKDRLRIN 458

  Fly   254 RFAWPKILKISYKRHHFYIKIRPGEFEQYESTIGFKLANHRAAKKLWKSCVEHHTFFRLMTPEPV 318
            ||||||||||||||.:|||||||||.||:|||:||||.||||||::||.||||||||||.:||..
Zfish   459 RFAWPKILKISYKRSNFYIKIRPGEAEQFESTVGFKLPNHRAAKRVWKVCVEHHTFFRLTSPEQP 523

  Fly   319 SKSKMFPVFGSTYRYKGRTQAES--TNTPVDRTPPKFNRTLSGARLTSRSMDALALAEKEKVARK 381
            :||| |...||.:||.|||||::  .:|.:||..|.|.||.|  :..|||:|...:......:|.
Zfish   524 TKSK-FLTLGSKFRYSGRTQAQARQASTLIDRPTPYFQRTSS--KRISRSLDGAPMVNISDYSRA 585

  Fly   382 SSTLDHRGDRNADGDAHSRSPIKNKKEKDADKEAKLREKKQKEKEEKERKEREKRELEEKKKAEK 446
            .       |..|.||   ..|   ..|.::|.:|                  .:.|||||...:.
Zfish   586 V-------DSAAGGD---NGP---ALELNSDSKA------------------PQVELEEKPSVDV 619

  Fly   447 AAKAALAAGAAAGAAVNGNDELNDSNKSDKSSGRRGVGIFSSGRKSKSGSPSKDGKDKSGKDKDK 511
            |....                ...::|:||..               :|:|..       |.|.:
Zfish   620 ATSVT----------------SESASKTDKGG---------------AGAPQT-------KSKLR 646

  Fly   512 EVGRLGLVVTSGLGDNQQDQNLDEAARNAAKNRGSTTPGVTRQYEYAVDN----------DGNTS 566
            ..|....|..|    |...::||:...:..|::.|.:. :.|.:..|...          .|:.:
Zfish   647 VQGENIYVRHS----NLMLEDLDKTQEDVLKHQASISE-LKRSFMEAAPEPRPSQWDKRLTGSPA 706

  Fly   567 PTRKSYTPGGFRYDQDPNSRKSGADGQEQLSPTSQQKKIGLAFNYAPGNENALKETAE--KLKAG 629
            .|.:...||..               :|:|:.....|   ..|:...|:.:|....||  ::.|.
Zfish   707 TTLRLQAPGSL---------------EEELTSLFLSK---ACFSALSGSCSAAAAPAEGRRVSAQ 753

  Fly   630 QLSPRTQDKLNRGQLSPKSRAKLLQDP-----LLSPTTRAKLQG-----SAVDAAAVPLSDSQKR 684
            ..:|:....|  .:...:..:|:||.|     ..|...:.::.|     ..|:...|.....:.:
Zfish   754 PEAPQISSSL--PEADRRDASKVLQRPPPANLTCSTEVKPEVNGQPEVVEVVEETVVIEEVVKAK 816

  Fly   685 SYSPTKGPQG------------------YSSGAPG-SYKPISDPTADFLESQRYNKEPGYVGPSK 730
            ..|||..|:.                  |.:..|. |.:.|.:...:.|..|....||..:..::
Zfish   817 PKSPTPEPESAAQDRSLSSDSESEDEAEYHAHTPSISVQLIKEEPEEELNQQAPPSEPEPITETE 881

  Fly   731 ADVAAGLAGAAGSKKPGS--------PTKTGKGAPGAAAAAAAGAAGAAAAAAKPKKRRVKIMVI 787
            ..|.|..|.....:.|..        ||:|.:..|.......:.........::|...:.:::.|
Zfish   882 PAVPAPSAQTEEDEAPNGHSPIPEAPPTETEEEEPHIVNGGVSRVETEVICCSEPPVVKTEMVTI 946

  Fly   788 TSKF-----DPSTKR---IDAENGSIEHSTGILDPATGLIDTKYGVI-DPKKGTLEAL------- 836
            :..|     :.|||.   :..|..:|.:....||   |..|.:.||: ..:..|.|:|       
Zfish   947 SDTFAAQKTEISTKEVPIVHTETKTITYEAAQLD---GNGDGEPGVLMTAQTITSESLCTTTTTH 1008

  Fly   837 ----------NTKTGKKEVFQGDVD 851
                      .|:..|:.|..||.|
Zfish  1009 ITKTLKGGLSETRIEKRIVITGDSD 1033

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
coraNP_523791.2 B41 34..224 CDD:214604 104/189 (55%)
FERM_C_4_1_family 219..312 CDD:270005 78/92 (85%)
FA 324..364 CDD:462582 18/41 (44%)
4_1_CTD 1613..1698 CDD:461774
wu:fi46h04XP_073790072.1 None
Blue background indicates that the domain is not in the aligned region.

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