DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment hppy and Myo3a

DIOPT Version :9

Sequence 1:NP_725863.1 Gene:hppy / 37203 FlyBaseID:FBgn0263395 Length:1218 Species:Drosophila melanogaster
Sequence 2:NP_680779.3 Gene:Myo3a / 667663 MGIID:2183924 Length:1621 Species:Mus musculus


Alignment Length:371 Identity:145/371 - (39%)
Similarity:214/371 - (57%) Gaps:52/371 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 NPQDEYELIQKIGSGTYGDVYKAKRIQSNELAAIKVIKLEPSDDI-QIIQQEIIMMRDCR-HPNI 83
            :|.|.:|:|:.||.||||.|:|....:|.:.||:|:  |:|..|| :.|:.|..::|... |||:
Mouse    24 DPSDTWEIIETIGKGTYGKVFKVLNKKSGQKAAVKI--LDPIHDIDEEIEAEYNILRTLSDHPNV 86

  Fly    84 IAYYGSYLRR-----DKLWICMEFCGGGSLQDIYQVTG------PLTEVQIAYMCRETLKGLEYL 137
            :.:||.|.::     ||||:.:|.|.|||:.|:  |.|      .::|..|||:..|.|.||::|
Mouse    87 VRFYGIYFKKDKINGDKLWLVLELCNGGSVTDL--VKGFLKRGERMSEPVIAYILHEALMGLQHL 149

  Fly   138 HSMGKMHRDIKGANILLTEYGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERK--GG 200
            ||...:|||:||.|||||..|.|||.|||||||:::|.::..:.:|||:||||||.|.|::  ..
Mouse   150 HSNKTIHRDVKGNNILLTTEGGVKLVDFGVSAQLSSTRHRLNTSVGTPFWMAPEVIACEQQLDTT 214

  Fly   201 YNQLCDIWACGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPTLNNKDKWSPTFHNFIKTALT 265
            |:..||.|:.|||||||.:..||:.:||||||||.:.::  .||.|...:.||..|::||...||
Mouse   215 YDARCDTWSLGITAIELGDGDPPLAELHPMRALFKIPRN--PPPKLRQPELWSAEFNDFISKCLT 277

  Fly   266 KNPKKRPTAERLLQHPFV-QCEMSLRVAKE-LLQKYQSPNPQFYYYLDGDEESVAGVPQRIASKM 328
            |:.:||||...||:|.|: |.|     .|: :|||      |...::|        :.|.:.|..
Mouse   278 KDYEKRPTVSDLLKHKFITQIE-----GKDVILQK------QLMEFID--------IHQCLGSTE 323

  Fly   329 TSRTNGVPAQNHTLKTGMTTNSTWNERSSSPETLPSDMSLLQYIDE 374
            .:|...:    ||.|..:..:..    ||..:.  .|::.|..:||
Mouse   324 KARHERI----HTKKGNLNRSLI----SSLKDV--DDLATLDVLDE 359

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hppyNP_725863.1 STKc_MAP4K3_like 25..283 CDD:270788 122/272 (45%)
S_TKc 26..283 CDD:214567 122/271 (45%)
CNH 869..1184 CDD:279162
Myo3aNP_680779.3 PKc_like 10..295 CDD:304357 124/276 (45%)
S_TKc 29..295 CDD:214567 122/271 (45%)
MYSc 345..1060 CDD:214580 4/17 (24%)
MYSc_Myo3 360..1048 CDD:276830 145/371 (39%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.