DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment hppy and ninaC

DIOPT Version :9

Sequence 1:NP_725863.1 Gene:hppy / 37203 FlyBaseID:FBgn0263395 Length:1218 Species:Drosophila melanogaster
Sequence 2:NP_523503.2 Gene:ninaC / 34012 FlyBaseID:FBgn0002938 Length:1501 Species:Drosophila melanogaster


Alignment Length:525 Identity:151/525 - (28%)
Similarity:240/525 - (45%) Gaps:118/525 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 NPQDEYELIQKIGSGTYGDVYKAKRIQSNELAAIKVIKLEPSDDIQIIQQEIIMMRD-CRHPNII 84
            :|.|::|:.::|..|....|::||.:.::.:.|:|:...:....:. |::|...:|| |.|||:.
  Fly    11 DPTDKFEIYEEIAQGVNAKVFRAKELDNDRIVALKIQHYDEEHQVS-IEEEYRTLRDYCDHPNLP 74

  Fly    85 AYYGSY-LRR----DKLWICMEFCGGGSLQD----IYQVTGPLTEVQIAYMCRETLKGLEYLHSM 140
            .:||.| |.:    |::|..||:|.||:..|    :.::...:.|..|||:.|||.:....|:..
  Fly    75 EFYGVYKLSKPNGPDEIWFVMEYCAGGTAVDMVNKLLKLDRRMREEHIAYIIRETCRAAIELNRN 139

  Fly   141 GKMHRDIKGANILLTEYGDVKLADFGVSAQITATINKRKSFIGTPYWMAPE-VAAVE-RKGGYNQ 203
            ..:||||:|.|||||:.|.|||.|||:|.|:.:|:.||.:.||:|.||||| |:|:| |:.....
  Fly   140 HVLHRDIRGDNILLTKNGRVKLCDFGLSRQVDSTLGKRGTCIGSPCWMAPEVVSAMESREPDITV 204

  Fly   204 LCDIWACGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPTLNNKDKWSPTFHNFIKTALTKNP 268
            ..|:||.|||.||||:.:||..|:||.||:|.:.::  .||||.....||...::||..:|.||.
  Fly   205 RADVWALGITTIELADGKPPFADMHPTRAMFQIIRN--PPPTLMRPTNWSQQINDFISESLEKNA 267

  Fly   269 KKRPTAERLLQHPFV------QCEMSLRVAKELLQ-----KYQSPNPQFY----YYLDGDEESVA 318
            :.||....:::|||:      :.||...:| |:|:     |.....|:.:    |....||:...
  Fly   268 ENRPMMVEMVEHPFLTELIENEDEMRSDIA-EMLELSRDVKTLYKEPELFVDRGYVKRFDEKPEK 331

  Fly   319 GVPQRIAS-KMTSRTNGVPAQNHTLKTG----------MTTNSTWNE--------------RSSS 358
            ..|:.:|: :.....|.:.:..|.:..|          ::.||  ||              ..|.
  Fly   332 MYPEDLAALENPVDENIIESLRHRILMGESYSFIGDILLSLNS--NEIKQEFPQEFHAKYRFKSR 394

  Fly   359 PETLPSDMSLLQYIDEELKLRATLPLNNDTKDPLGAECSCSSHNGGAA------------GGGGG 411
            .|..|...|:.....:::       |::  |:|.....|..|::|.:.            |.|..
  Fly   395 SENQPHIFSVADIAYQDM-------LHH--KEPQHIVLSGESYSGKSTNARLLIKHLCYLGDGNR 450

  Fly   412 GGVG------------VGAGGAAAN-------------GSSSSSGGA--------------TVGT 437
            |..|            |.||....|             |.:....||              |.||
  Fly   451 GATGRVESSIKAILMLVNAGTPVNNDSTRCVLQYCLTFGKTGKMSGAVFNMYMLEKLRVATTDGT 515

  Fly   438 THHQH 442
            .|:.|
  Fly   516 QHNFH 520

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hppyNP_725863.1 STKc_MAP4K3_like 25..283 CDD:270788 103/269 (38%)
S_TKc 26..283 CDD:214567 103/268 (38%)
CNH 869..1184 CDD:279162
ninaCNP_523503.2 STKc_myosinIII_N_like 9..282 CDD:270785 105/273 (38%)
S_TKc 16..282 CDD:214567 103/268 (38%)
MYSc 327..1034 CDD:214580 36/205 (18%)
MYSc_Myo21 346..1022 CDD:276848 33/186 (18%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.