DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ena and Spred3

DIOPT Version :9

Sequence 1:NP_001137709.1 Gene:ena / 37201 FlyBaseID:FBgn0000578 Length:980 Species:Drosophila melanogaster
Sequence 2:XP_008757367.2 Gene:Spred3 / 308478 RGDID:1311713 Length:500 Species:Rattus norvegicus


Alignment Length:654 Identity:132/654 - (20%)
Similarity:187/654 - (28%) Gaps:326/654 - (49%)


- Green bases have known domain annotations that are detailed below.


  Fly   179 SSSSSLIFSTLRKCVSPSNPSVNPN--QPSKTQPSKLGCSMSF-----SIRTTTATAATAAAANA 236
            |||.||         .||. :|.|.  .||...|.....|..|     |.|.....::.|.|:..
  Rat    10 SSSRSL---------GPSG-NVRPPCFYPSPKPPPPPHASSRFPLPPPSPRLPVPVSSAAGASQG 64

  Fly   237 ATATLSTQQQQQQAQQQHKQHLYSNIHHYLIRQQQQKQHYTLQRRHNSVKDKFIGGITTIFAEQS 301
            |.|.                           |:::::     .||..|...:.:.|       :.
  Rat    65 AGAN---------------------------RRRRRR-----PRRRRSEPGRSLPG-------RY 90

  Fly   302 IIGARASVMVYDDNQKKWVPSGSSSGLSKVQIYHHQ--------QNNTFRVVGRKLQDHEVVINC 358
            ::..||.||..||:...|:|.| ..|||:|.:...:        :...:.:.|.:|:|.:..:.|
  Rat    91 MVRVRAVVMARDDSSGGWLPVG-GGGLSQVSVCRVRGARPEGGARQGHYVIHGERLRDQKTTLEC 154

  Fly   359 SILKGLKYNQATATFHQWR--DSKFVYGLNFSSQNDAENFARAMMHALEVLSGRVANNPGGPPTN 421
            ::..||.||:....||.|.  |.||  ||.|.|..:|:.|.:::..||..||             
  Rat   155 TLRPGLVYNKVNPIFHHWSLGDCKF--GLTFQSPAEADEFQKSLQAALAALS------------- 204

  Fly   422 GNGYEEDMGYRTMTSEDAAILRQNNSIGGHVTPSAQTPTSQTNQNNIPQSPPTPQGHHRTSSAPP 486
                                       .|.:|||:.:.:|         ||      .|.::..|
  Rat   205 ---------------------------RGSLTPSSSSSSS---------SP------SRDTAETP 227

  Fly   487 APQPQQQQQQQQAQQMGQPGSHYGPTGNGPTSNGLPQQVNSQIPPAPQQQPQQQQFQQQQQQQQY 551
            .|                                |...|:|.                       
  Rat   228 CP--------------------------------LTSHVDSD----------------------- 237

  Fly   552 QQMVQAGYAPSQQYQQPHYVLSNSNPNLTVHQYPTQQAQQQPPQAPQPPLQNGGMYMVGHGHLPS 616
                                 |:|          :...|:.||.|..|              :.:
  Rat   238 ---------------------SSS----------SHSRQETPPTAVAP--------------IAT 257

  Fly   617 SASANSVVYASQQQMLPQAHPQAPQAPTMPGPGYGGPPVPPPQQQAENPYGQVPMPPPMNPSQQQ 681
            ..||.:.                             ||..|||::                    
  Rat   258 VESATAF-----------------------------PPATPPQRR-------------------- 273

  Fly   682 QPGQVPLNRMSSQGGPGGPPAPAPPPPPPSFGGAA----GG---------GPPPPAPPQMFN--- 730
                    |.|:|..|...|....|.|..|..||.    ||         ||||  ||...:   
  Rat   274 --------RSSAQSYPPLLPFTGIPEPSESLAGAGSQGRGGRGYEDYRRSGPPP--PPLALSTCV 328

  Fly   731 ------GAPPPPAMGGGPP---PAP---PAPPAMGGGPPPAPGGPGAPPPPPPPPGLGGAPKKED 783
                  ||....|:  |||   |||   .||||:...|||.||         |.|    ||.|..
  Rat   329 VRFAKTGALRGAAL--GPPVSLPAPLTEAAPPALPARPPPGPG---------PTP----APAKAS 378

  Fly   784 PQAD 787
            |:|:
  Rat   379 PEAE 382

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
enaNP_001137709.1 EVH1_Ena_VASP-like 301..408 CDD:269918 35/116 (30%)
VASP_tetra 945..979 CDD:285929
Spred3XP_008757367.2 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166335970
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.840

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