| Sequence 1: | XP_011512881.1 | Gene: | JARID2 / 3720 | HGNCID: | 6196 | Length: | 1309 | Species: | Homo sapiens |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_502032.2 | Gene: | rbr-2 / 177985 | WormBaseID: | WBGene00004319 | Length: | 1477 | Species: | Caenorhabditis elegans |
| Alignment Length: | 785 | Identity: | 167/785 - (21%) |
|---|---|---|---|
| Similarity: | 321/785 - (40%) | Gaps: | 204/785 - (25%) |
- Green bases have known domain annotations that are detailed below.
|
Human 621 PVLRPSAKEFHDPLIYIESVRAQVEKFGMCRVIPPPDWRPECKLNDEMRFVTQIQHIHKLGRRWG 685
Human 686 PNVQRL----ACIK-KHL---------KSQGITMDELPL-IGGCELDLACFFRLINEMGGMQQVT 735
Human 736 DLKKWNKLADMLR--IPRTAQDRLAK-LQEAYCQYLLSYDSLSPEEHRRLEKEVLMEKEILEKRK 797
Human 798 GPLEGHTENDHHKF---HPLPRFE---PKNGLIHG------VAPRNGFR--------SKLKEVGQ 842
Human 843 AQLKT---GRRRLFAQEKEVVKEEEEDKGVLND-FHKCIYKGRSVSLTTFYRTARNIMSMC---- 899
Human 900 -------FSKEPAPAEIEQEYWR---LVEEKDCHVAVHCGKVDTNTH------------------ 936
Human 937 -----------------------------------------GSGFP----------VGKSEPFSR 950
Human 951 HGWNLTVLPNNTGSILRHLG-AVPGVTIPWLNIGMVFSTSCWSRDQNHLPY-IDYLHTGADCIWY 1013
Human 1014 CIPAEEENKLEDVVHTLLQANGTPGLQMLESNVM------ISPEVLCKEGIKVHRTVQQSGQFVV 1072
Human 1073 CFPGSFVSKVCCGYSVSETVHFATTQWTSMGFETAKEMK--RRHIAKPFSMEKLLYQIAQAEAKK 1135
Human 1136 ENGPTLSTISALLDELRDTELRQRRQLFEAGLHSSARYGSHDGSSTVADGKKKPRKWLQLETSER 1200
Human 1201 RCQICQHLCYLSMVVQENENVVFCLECALRHVEKQKSC--RGLKLMYRYDEEQIISLVNQICGKV 1263
Human 1264 SGKNG 1268 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| JARID2 | XP_011512881.1 | JmjN | 619..660 | CDD:128818 | 14/38 (37%) |
| BRIGHT | 686..777 | CDD:128777 | 27/108 (25%) | ||
| JmjC | 979..1094 | CDD:202224 | 36/121 (30%) | ||
| zf-C5HC2 | 1202..1255 | CDD:280996 | 11/54 (20%) | ||
| rbr-2 | NP_502032.2 | JmjN | 55..96 | CDD:128818 | 14/38 (37%) |
| BRIGHT | 122..214 | CDD:128777 | 24/98 (24%) | ||
| PHD_SF | 321..368 | CDD:304600 | 7/56 (13%) | ||
| JmjC | 501..617 | CDD:202224 | 36/121 (30%) | ||
| zf-C5HC2 | 709..761 | CDD:280996 | 11/54 (20%) | ||
| PLU-1 | 788..1130 | CDD:285609 | |||
| PHD | 1208..1254 | CDD:214584 | |||
| PHD3_KDM5A_like | 1413..1463 | CDD:277083 | |||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 1 | 0.900 | - | - | E1_COG0055 | |
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| Isobase | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 1 | 1.010 | - | - | D664180at2759 | |
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 1 | 1.100 | - | - | O | PTHR10694 |
| Phylome | 1 | 0.910 | - | - | ||
| RoundUp | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 1 | 1.000 | - | - | ||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 5 | 4.920 | |||||