DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment botv and AT5G41250

DIOPT Version :9

Sequence 1:NP_523790.1 Gene:botv / 37198 FlyBaseID:FBgn0027535 Length:972 Species:Drosophila melanogaster
Sequence 2:NP_198941.1 Gene:AT5G41250 / 834126 AraportID:AT5G41250 Length:561 Species:Arabidopsis thaliana


Alignment Length:547 Identity:114/547 - (20%)
Similarity:191/547 - (34%) Gaps:176/547 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 QFRRYKLPMVLLMLLFLVSCLAYR-----------ILSVEQDAPPLDLHRSSP----LLDAYEDF 99
            :|..|.||.:.|....|..||::.           |.|.:.:.|..:...|.|    :.:....|
plant    26 RFLYYTLPALFLFFFLLYLCLSFTTGISYNNFHMCIFSRKFNDPYCNTAGSKPGFQIISEENVTF 90

  Fly   100 SAMRAGDLKMRI-EEMVRIKSTVSVELRELESRRQKLQSDISQYNQKIEELKQELLREQTELERL 163
            :...|||   |: ::..:|.::|.|     :..:.|.:.|:   |..|     ||..|:...:.:
plant    91 AGEIAGD---RVSKDHNKILNSVPV-----QEHKTKNKVDL---NSLI-----ELKAEEEYSKYI 139

  Fly   164 KISVEQAQVAQREAVQRNTPDLALPRSLLPNTLPRKSNPITGGMAASCEMHNCFNHSRCSLTSGF 228
            |.:.|....|.|.|::.    |.|.||.|.......:.|      .|||              |.
plant   140 KPTSEDEGYALRAAIKY----LYLQRSWLSPGDENLNKP------RSCE--------------GK 180

  Fly   229 PVYLYDPDEHSVQRKGYDIDGFLKTTLKQTLGYNAHIVKDPKHACIYLVL--VGEAL--LEQDLL 289
            .||:||                |.:.....|....:.:....:.|.|...  .|||:  |.:...
plant   181 GVYVYD----------------LPSKFNSDLLVGCNDILPGVNLCSYFKNEGFGEAIKNLGKGWF 229

  Fly   290 RNNRYAAQEAEHQQPSTPTLENDCPVDME---KLYSLPYWGG----------------------- 328
            ..:.|:.:...|.:    .|::.|.|..|   ||:.:||:||                       
plant   230 ATHMYSLEPILHSR----VLKHPCRVYNETQAKLFFVPYYGGYDVLRWHYRNVSEDVKDRLGIEV 290

  Fly   329 -------------DGRNHVLLNLA------RRDLTSHRTNPL---YRQNTMRAIVVQSAFEREQF 371
                         .|::||.: |.      |||.....:..|   ..||..:.::     ||:.:
plant   291 LKWLNSKESWRRNAGKDHVFV-LGKITWDFRRDKDPWGSRFLELQEMQNPTKLLI-----ERQPW 349

  Fly   372 RPGYDLIVP-PILGPPGGD----VWQECAEMVPARRKYLLTYQGELRPKQSSLNPLDAFILEHLA 431
            :.. |:.:| |....|..|    .||  .:::...|:.|:::.|..||.    ||.:  |...|.
plant   350 QVN-DIAIPHPTYFHPRTDDDITRWQ--IKIMSKLRRNLVSFAGGARPD----NPNN--IRSTLI 405

  Fly   432 DMAKGATQDQFVLQFQCVPATEQQEGDSLPDWTLCGSDSSRRQLLKDSTFSLILPPLNGRVSSTL 496
            :....:.|.:|:   .|...:             |.:..:...|.:||.|.| .||     ..:.
plant   406 EQCISSNQCRFL---NCTNES-------------CTNPKNVLDLFQDSEFCL-QPP-----GDSA 448

  Fly   497 MLARIYEALRSGAVPVILGADELRLPY 523
            ....::::|.||.:|||.      .||
plant   449 TRRSVFDSLISGCIPVIF------TPY 469

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
botvNP_523790.1 TBPIP <107..185 CDD:284512 16/78 (21%)
Exostosin 224..551 CDD:281069 72/357 (20%)
Glyco_transf_64 714..949 CDD:286358
AT5G41250NP_198941.1 Exostosin 176..508 CDD:281069 75/371 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D789556at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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