DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment botv and Extl2

DIOPT Version :9

Sequence 1:NP_523790.1 Gene:botv / 37198 FlyBaseID:FBgn0027535 Length:972 Species:Drosophila melanogaster
Sequence 2:NP_001156986.1 Gene:Extl2 / 58193 MGIID:1889574 Length:330 Species:Mus musculus


Alignment Length:269 Identity:88/269 - (32%)
Similarity:132/269 - (49%) Gaps:59/269 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   712 EQFTIVMLTYEREQVLMDSLGRLYGLPYLHKVVVVWNS--PKPPLDDLRWPDIGV-PVAVLRAPR 773
            :.||::|.||.|..:|:..|.....:|.||||:||||:  .|.| ::| |..:|. |:.|:..|:
Mouse    65 DSFTLIMQTYNRTDLLLRLLNHYQAVPSLHKVIVVWNNVGEKGP-EEL-WNSLGPHPIPVIFKPQ 127

  Fly   774 --NSLNNRFLPFDVIETEAVLSVDDDAHLRHDEILFGFRVWREHRDRVVGFPGRYH--------- 827
              |.:.||...|..:||.|||.||||..:...:::|.|.:|::..|:::||..|.|         
Mouse   128 TANKMRNRLQVFPEVETNAVLMVDDDTLISAQDLVFAFSIWQQFPDQIIGFVPRKHVSTSSGIYS 192

  Fly   828 --AWDLGNP---NGQWHYNSNYSCELSMVLTGAAFVHKYYLYLYTYHLPQAIRDKVDEYMNCEDI 887
              .::|..|   ||.         :.||||.||:|.:..||.|:... |.|:...:||..||:||
Mouse   193 YGGFELQTPGPGNGD---------QYSMVLIGASFFNSKYLELFQKQ-PAAVHALIDETQNCDDI 247

  Fly   888 AMNFLVSHITRKP------PVKVTSRWTFRCPGCPVSLSEDDT----------HFQERHKCINFF 936
            ||||||:..|.||      |:.:            |:|.::..          ||.:|..|||..
Mouse   248 AMNFLVTRHTGKPSGIFVKPINM------------VNLEKETNGYSGMWHRAEHFLQRSYCINKL 300

  Fly   937 SRVFGYTPL 945
            ..::...||
Mouse   301 VNIYDGMPL 309

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
botvNP_523790.1 TBPIP <107..185 CDD:284512
Exostosin 224..551 CDD:281069
Glyco_transf_64 714..949 CDD:286358 88/267 (33%)
Extl2NP_001156986.1 Glyco_transf_64 67..313 CDD:286358 88/267 (33%)
Substrate binding. /evidence=ECO:0000269|PubMed:12562774 130..135 1/4 (25%)
Substrate binding. /evidence=ECO:0000269|PubMed:12562774 151..153 1/1 (100%)
Substrate binding. /evidence=ECO:0000269|PubMed:12562774 242..246 2/3 (67%)
Substrate binding. /evidence=ECO:0000269|PubMed:12562774 280..293 2/12 (17%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D314330at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11062
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.020

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