DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment botv and Extl1

DIOPT Version :9

Sequence 1:NP_523790.1 Gene:botv / 37198 FlyBaseID:FBgn0027535 Length:972 Species:Drosophila melanogaster
Sequence 2:NP_062524.2 Gene:Extl1 / 56219 MGIID:1888742 Length:669 Species:Mus musculus


Alignment Length:807 Identity:205/807 - (25%)
Similarity:331/807 - (41%) Gaps:221/807 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   179 QRNTPDLALPRSLLPNTLPRKSNPITGGMAASCEMHNCFNHSRCSLTSGFPVYLYDP--DEHSVQ 241
            :.|..|:|        .|||.|.      .:||....||:.|:|. .....::::.|  .....|
Mouse    59 ETNPEDVA--------QLPRVSR------GSSCTWGACFDTSKCR-GKVLKIFVHSPAGPTSEAQ 108

  Fly   242 RKGYD-IDGFLKTTLKQTLGYNAHIVKDPKHACIYLVLVGEALLEQDLLRNNRYAAQEAEHQQPS 305
            |:..| ::|...:.|            .|..||:.|.|..:          :|..|         
Mouse   109 RRILDSLEGSRYSAL------------SPADACLLLFLPSQ----------DRRGA--------- 142

  Fly   306 TPTLENDC-PVDMEKLYSLPYWGGDGRNHVLLNLARRDLTSHRTNPLYRQNTMRAIVVQSAFERE 369
                   | |:.       |.|.| ||||::|:|.....|          ...:|:|.:::...:
Mouse   143 -------CGPLP-------PNWNG-GRNHLVLSLYPAPCT----------RLGQAMVAEASPSSD 182

  Fly   370 QFRPGYDLIVP------PILGPPGGDVWQECAEMVPARRKYLLTYQGELRPKQSSLNPLDAFILE 428
            .||||:||.:|      |:.|...|.:.|..    |.....||....|....:.:.....|.:.:
Mouse   183 IFRPGFDLALPYLPEAHPLRGGAPGKLQQHS----PQPGATLLAVAEEKGRWRITSTHASACLWD 243

  Fly   429 HLADMAKGATQDQFVLQFQCVPATEQQEGDSLPDWTLCGSDSSRRQLLKDSTFSLILPPLNGRVS 493
            ...:...|..|              ...|::||:.|.|                 ::|   |..|
Mouse   244 RHCEQDPGPQQ--------------TYPGETLPNATFC-----------------LIP---GHRS 274

  Fly   494 STLMLARIYEALRSGAVPVILGADELRLPYAETVDWRRTALLLPKARITELHFLLRAVQDADLLL 558
            :|   :...:||::|.:||:| :....||::|.:||.:.|::..:....::...||.:..:.:|.
Mouse   275 AT---SCFLQALQAGCIPVLL-SPRWELPFSEVIDWTKAAIIADERLPLQVLAALREMLPSRVLA 335

  Fly   559 LRRQGRLIWERYLSSVQATVDTVIASLRDRL-GIPPRPVPSVIAQSVFNSTFIPLKSDPPVGLDT 622
            ||:|.:.:|..|.|||:..:.|.:..::||: |....|      ..::||        ||..|..
Mouse   336 LRQQTQFLWTAYFSSVEKVIHTTLEIIQDRIWGASGHP------SLMWNS--------PPGALLA 386

  Fly   623 EPEESLGPIEPPYPSPAFRRNYTILRMQAKEAWNDWLDPFYLYPQLPFDPALPSEAKFMGSHTGF 687
            .|..|                 |.|:        |:  ||| :.||                   
Mouse   387 LPTFS-----------------TSLQ--------DF--PFY-HLQL------------------- 404

  Fly   688 RPIGKGLGGAGKEFGESLGGNYPREQFTIVMLTYEREQVLMDSLGRLYGLPYLHKVVVVWNSPKP 752
                               |:.|...|:.|:......:.|:..:..:.|..:..:::::|||.|.
Mouse   405 -------------------GSGPGSSFSAVIWVGASGESLLKLIQEVAGSRHCAQILILWNSEKL 450

  Fly   753 PLDDLRWPDIGVPVAVLRAPRNSLNNRFLPFDVIETEAVLSVDDDAHLRHDEILFGFRVWREHRD 817
            |.|  |||:..||:.|::..| .::|||.|:..|.|..:||:|..:.|...|:.|.|.||:...:
Mouse   451 PPD--RWPETAVPLTVIKGHR-KVSNRFFPYSNISTNVILSLDAQSTLSTSEVDFAFVVWQSFPE 512

  Fly   818 RVVGFPGRYHAWDLGNPNGQWHYNSNYSCELSMVLTGAAFVHKYYLYLYTYHLPQAIRDKVDEYM 882
            |:|||....|.||  ...|.|.|.:..:.|.|||||.|||.|:||..|:|:.||:|:|...||..
Mouse   513 RMVGFLSGSHFWD--EAQGGWGYRTGMTNEFSMVLTTAAFYHRYYHTLFTHSLPKALRTIADETP 575

  Fly   883 NCEDIAMNFLVSHITRKPPVKVTSRWTFRCP-------GCPVSLSEDDTHFQERHKCINFFSRVF 940
            .|.|:.|||||:.:|:.||:||.  :..:.|       |.|..:.|.....|:   |||..:..|
Mouse   576 TCVDVLMNFLVATVTKLPPIKVP--YGRQHPEAVPMDSGDPRPVPEPQPLDQD---CINRLAAGF 635

  Fly   941 GYTPLLNTQYRADSILFKTRIPHDKQK 967
            |:.||:::|.|.|.:|||..:...::|
Mouse   636 GHMPLVSSQVRLDPVLFKDPVSVQRKK 662

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
botvNP_523790.1 TBPIP <107..185 CDD:284512 1/5 (20%)
Exostosin 224..551 CDD:281069 68/336 (20%)
Glyco_transf_64 714..949 CDD:286358 86/241 (36%)
Extl1NP_062524.2 Exostosin 89..328 CDD:281069 68/337 (20%)
Glyco_transf_64 412..644 CDD:286358 86/241 (36%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 601..621 4/19 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D314330at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X187
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.920

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