DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment botv and ext1c

DIOPT Version :9

Sequence 1:NP_523790.1 Gene:botv / 37198 FlyBaseID:FBgn0027535 Length:972 Species:Drosophila melanogaster
Sequence 2:NP_001035420.1 Gene:ext1c / 497281 ZFINID:ZDB-GENE-050211-5 Length:737 Species:Danio rerio


Alignment Length:832 Identity:245/832 - (29%)
Similarity:370/832 - (44%) Gaps:188/832 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   174 QREAVQRNTPDLALPRSLLPNTLPRKSNPITGGMAAS----------------CEMHNCFNHSRC 222
            :|..|.|..||. |.|:||||...:......||...|                |.|..||:..||
Zfish    37 RRGEVPRPWPDW-LDRALLPNFAEQLDLQNGGGPGDSPRQRKQAWSSIYKDSRCRMDTCFDFGRC 100

  Fly   223 SLTSGFPVYLYDPDEHSVQRKGYDIDGFLKTTLKQTLGYNAHIVKDPKHACIYLVLVGEALLEQD 287
            ...|||.||:|.|:      ||..:....:..| .::..:.:...||:.||::  ::|...|::|
Zfish   101 QTQSGFRVYIYPPE------KGERVSESYRKIL-TSVSESRYYTSDPREACLF--VLGIDTLDRD 156

  Fly   288 LLRNNRYAAQEAEHQQPSTPTLENDCPVDMEKLYSLPYWGGDGRNHVLLNLARRDLTSHRTNPLY 352
            .|            .|...|.::       |::...|.| .||||||:.||      ...|.|.|
Zfish   157 QL------------SQQFVPNVD-------ERIRGYPLW-NDGRNHVIFNL------YSGTWPNY 195

  Fly   353 RQ----NTMRAIVVQSAFEREQFRPGYDLIVP------PILGPPGGDVWQECAEMVPARRKYLLT 407
            .:    |..:||:.:::...|.||||:|:.:|      |..|...|  |. ....||.||||||.
Zfish   196 TEDLGFNVGQAILAKASLNTEHFRPGFDISIPLFSKEHPQKGGKRG--WL-VRNSVPPRRKYLLM 257

  Fly   408 YQGELRPKQSSLNPLDAFILEHLADMAKGATQDQFVLQFQCVPATEQQEGDSLPDW-----TLCG 467
            ::|     :..|..:.:.....|..:..|.         ..|..|..:.|   .||     ..|.
Zfish   258 FKG-----KRYLTGIGSDTRNALHHIHNGK---------DIVSLTTCRHG---KDWEKHKDARCD 305

  Fly   468 SDSSR------RQLLKDSTFSLILPPLNGRVSSTLMLARIYEALRSGAVPVILGADELRLPYAET 526
            .|:..      ::||.:|||.|:  |...|:.|    .|..|:|::..:||:| ::...||:::.
Zfish   306 HDNQEYERFDYQELLHNSTFCLV--PRGRRLGS----FRFLESLQAACIPVLL-SNGWELPFSDV 363

  Fly   527 VDWRRTALLLPKARITELHFLLRAVQDADLLLLRRQGRLIWERYLSSVQATVDTVIASLRDRLGI 591
            :.|.:..:...:..:.::...:|||....:|.||:|.:.:|:.|.|||...|.|.:..::||   
Zfish   364 IQWNQAVVEGDERLLLQVPSTVRAVGMDRVLALRQQTQTLWDAYFSSVDKIVLTTLEIIKDR--- 425

  Fly   592 PPRPVPSVIAQS--VFNSTFIPLKSDPPVGLDTEPEESLGPIEPPYPSPAFRRNYTILRMQAKEA 654
                |.|.|:::  ::|:.        |.||...||.|......|:                   
Zfish   426 ----VYSHISRNKLMWNAL--------PGGLLVLPEFSTHLAHYPF------------------- 459

  Fly   655 WNDWLDPFYLYPQLPFDPALPSEAKFMGSHTGFRPIGKGLGGAGKEFGESLGGNYPREQFTIVML 719
                   :||                   |.|..|        |:||...:....|         
Zfish   460 -------YYL-------------------HLGISP--------GQEFTAVIHATSP--------- 481

  Fly   720 TYEREQVLMDSLGRLYGLPYLHKVVVVWNSPKPPLDDLRWPDIGVPVAVLRAPRNSLNNRFLPFD 784
            ...:.|.:|..|..:....|..:::::|||.|.|....:||.:.||:.|... |...::||||..
Zfish   482 LVSQSQPIMKLLQVVSKSKYCSQIIILWNSEKSPPQRSKWPPMPVPLTVTDG-RRKTSSRFLPHA 545

  Fly   785 VIETEAVLSVDDDAHLRHDEILFGFRVWREHRDRVVGFPGRYHAWDLGNP-NGQWHYNSNYSCEL 848
            .||||||||:|:|..|...||.|.|.|||...||:||:|.|.|.||   | ...|.|.|.::.|.
Zfish   546 AIETEAVLSLDEDTVLLTSEINFAFHVWRSFPDRIVGYPPRSHFWD---PVKKAWGYTSKWTNEY 607

  Fly   849 SMVLTGAAFVHKYYLYLYTYHLPQAIRDKVDEYMNCEDIAMNFLVSHITRKPPVKVTSRWTFR-- 911
            |::||||||.|:||.:|::::||.::|..||...|||||.||||||.:|..|||||..|..::  
Zfish   608 SIILTGAAFYHRYYHHLFSHYLPSSLRALVDHSCNCEDILMNFLVSSVTHLPPVKVAQRKQYKEM 672

  Fly   912 --CPGCPVSLSEDDTHFQERHKCINFFSRVFGYTPLLNTQYRADSILFKTRI 961
              ..|..::...:..||.:|.:|:|.||..|||.||.::|:|.|.:|||..:
Zfish   673 PSLQGTKMAPWANPEHFTQRQECVNTFSSWFGYMPLEHSQFRLDPVLFKDHV 724

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
botvNP_523790.1 TBPIP <107..185 CDD:284512 4/10 (40%)
Exostosin 224..551 CDD:281069 86/347 (25%)
Glyco_transf_64 714..949 CDD:286358 98/239 (41%)
ext1cNP_001035420.1 Exostosin 103..388 CDD:281069 86/346 (25%)
Glyco_transf_64 472..712 CDD:286358 100/252 (40%)
Substrate binding. /evidence=ECO:0000250|UniProtKB:Q9ES89 536..540 0/3 (0%)
Substrate binding. /evidence=ECO:0000250|UniProtKB:Q9ES89 556..558 1/1 (100%)
Substrate binding. /evidence=ECO:0000250|UniProtKB:Q9ES89 641..645 2/3 (67%)
Substrate binding. /evidence=ECO:0000250|UniProtKB:Q9ES89 679..692 2/12 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D314330at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X187
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.920

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