DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment botv and extl3

DIOPT Version :9

Sequence 1:NP_523790.1 Gene:botv / 37198 FlyBaseID:FBgn0027535 Length:972 Species:Drosophila melanogaster
Sequence 2:NP_001008036.1 Gene:extl3 / 493398 XenbaseID:XB-GENE-855819 Length:919 Species:Xenopus tropicalis


Alignment Length:991 Identity:477/991 - (48%)
Similarity:630/991 - (63%) Gaps:120/991 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 GSGGGNEACAPNSSSAQIRHSMGFRTSWMRQFRRYKLPMVLLMLLFLVSCLAYRILSVEQDAPPL 84
            |.|.|.:..       .:|.|...|.||        |...|.::|.....:|:..|:...||...
 Frog    11 GLGNGGQPW-------MLRWSSRIRLSW--------LSFTLFIILVFFPLIAHYYLTTIDDANDP 60

  Fly    85 DLHRSSPLLDAYEDFSAMRAG----DLKMRIEEMVRIKSTVSVELRELESRRQKLQSDISQYNQK 145
            |.....|           |.|    ::| .::::.||:.:||.||.:||::||:|.|:|::.|.|
 Frog    61 DRRIFGP-----------RTGNELCEVK-HVQDLCRIRESVSEELLQLEAKRQELNSEIAKLNLK 113

  Fly   146 IEELKQELLREQTELERLKISVEQAQVAQREAVQRNTPDLALPRSLLPN------TLPRKSNPIT 204
            ||..|:.:...:.:|.:||..:.|.:.:.:|.:.:|.|.|:||..|||.      .||:...   
 Frog   114 IEACKKSIENAKQDLLQLKNVISQTEHSYKELMAQNQPKLSLPIRLLPEKDDINIPLPKSKR--- 175

  Fly   205 GGMAASCEMHNCFNHSRCSLTSGFPVYLYDPDEHSVQRKGYDIDGFLKTTLKQTLGYNAHIVKDP 269
                 :|.:||||::|||.|||||||::|:.|::..   |..||..:|..|:.::..|.::.::.
 Frog   176 -----NCGLHNCFDYSRCPLTSGFPVFVYNSDQYPF---GNFIDPLIKQALEASVRNNVYVTENA 232

  Fly   270 KHACIYLVLVGEALLEQDLLRNNRYAAQEAEHQQPSTPTLENDCPVDM-EKLYSLPYWGGDGRNH 333
            .:||||:||:||.                   |:|..|.     |.:: |:|:|||||..||.||
 Frog   233 NNACIYVVLMGEM-------------------QEPVMPK-----PTELEEQLHSLPYWRTDGHNH 273

  Fly   334 VLLNLARRDLTSHRTNPLYRQNTMRAIVVQSAFEREQFRPGYDLIVPPILGPPGGDVWQECAEMV 398
            :::||:|:   |...|.||..:|.||::.||.|...|:|||:|::|.|::.......:.|....|
 Frog   274 LIINLSRK---SETQNYLYNVSTGRAMIAQSTFYDLQYRPGFDIVVSPLVHAMSEPNFLEIPPQV 335

  Fly   399 PARRKYLLTYQGE-LRPKQSSLNPLDAFILEHLADMAKG-----------ATQD---QFVL-QFQ 447
            |.:||||.::||| :...:|||....:| .|.:...|..           |.||   .||: :|.
 Frog   336 PVKRKYLFSFQGEKIESLRSSLQEARSF-EEEMEGNAPADYDDRIITTLKAVQDSKLDFVMVEFT 399

  Fly   448 CVPATEQQEGDSLP-DWTLCGSDSSRRQLLKDSTFSLILPPLNGR-VSSTLMLARIYEALRSGAV 510
            |    :.|...||| :|.|||....|.:|||.|||:||:.|.:.: |.|.....|::|||..||:
 Frog   400 C----KNQAKPSLPTEWALCGERDDRLELLKQSTFALIITPGDSQLVISAGSAMRLFEALEVGAI 460

  Fly   511 PVILGADELRLPYAETVDWRRTALLLPKARITELHFLLRAVQDADLLLLRRQGRLIWERYLSSVQ 575
            ||||| ::::|||.:|:.|....|:|||.||||:|||||::.|.|||.||||||.:||.|.|:..
 Frog   461 PVILG-EQVQLPYHDTIRWNEAVLILPKPRITEVHFLLRSISDNDLLSLRRQGRFLWETYFSTSD 524

  Fly   576 ATVDTVIASLRDRLGIPPRPV---PSVIAQSVFNSTFIPLKSDPPVGLDTEPEES----LGPI-- 631
            ...:|::|::|.|:.||..|:   |:|         .||.:|....|.|....::    |||:  
 Frog   525 TVFNTILATVRTRIQIPAAPIKEEPAV---------EIPHRSGKAAGTDPNMADNGDLDLGPVET 580

  Fly   632 EPPYPSPAFRRNYTILRMQAKEAWNDWLDPFYLYPQLPFDPALPSEAKFMGSHTGFRPIGKGLGG 696
            ||||.||.:.||:|:........||....||:|:|..||||.|||||||:||.|||||||.|.||
 Frog   581 EPPYASPKYLRNFTLTAADIYRNWNTAPGPFHLFPHTPFDPLLPSEAKFLGSGTGFRPIGGGAGG 645

  Fly   697 AGKEFGESLGGNYPREQFTIVMLTYEREQVLMDSLGRLYGLPYLHKVVVVWNSPKPPLDDLRWPD 761
            :||||..:||||.||||||:||||||||:|||:||.||.|||||:||||||||||.|.:||.|||
 Frog   646 SGKEFQAALGGNVPREQFTVVMLTYEREEVLMNSLERLNGLPYLNKVVVVWNSPKLPSEDLLWPD 710

  Fly   762 IGVPVAVLRAPRNSLNNRFLPFDVIETEAVLSVDDDAHLRHDEILFGFRVWREHRDRVVGFPGRY 826
            ||||:.::|..:|||||||||:|.||||||||:|||||||||||:||||||||.|||:|||||||
 Frog   711 IGVPIVIVRTEKNSLNNRFLPWDQIETEAVLSIDDDAHLRHDEIMFGFRVWREARDRIVGFPGRY 775

  Fly   827 HAWDLGNPNGQWHYNSNYSCELSMVLTGAAFVHKYYLYLYTYHLPQAIRDKVDEYMNCEDIAMNF 891
            ||||:  |:..|.||||||||||||||||||.||||.|||:|.:||||||.||||:|||||||||
 Frog   776 HAWDI--PHRSWLYNSNYSCELSMVLTGAAFFHKYYAYLYSYVMPQAIRDMVDEYINCEDIAMNF 838

  Fly   892 LVSHITRKPPVKVTSRWTFRCPGCPVSLSEDDTHFQERHKCINFFSRVFGYTPLLNTQYRADSIL 956
            ||||||||||:||||||||||||||.:||.||:||.|||||||||.:|:||.|||.||:|.||:|
 Frog   839 LVSHITRKPPIKVTSRWTFRCPGCPQALSHDDSHFHERHKCINFFVKVYGYMPLLYTQFRVDSVL 903

  Fly   957 FKTRIPHDKQKCFKYI 972
            ||||:||||.||||:|
 Frog   904 FKTRLPHDKTKCFKFI 919

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
botvNP_523790.1 TBPIP <107..185 CDD:284512 26/77 (34%)
Exostosin 224..551 CDD:281069 130/345 (38%)
Glyco_transf_64 714..949 CDD:286358 186/234 (79%)
extl3NP_001008036.1 TPR_MLP1_2 <71..150 CDD:369600 24/79 (30%)
Exostosin 190..500 CDD:367297 130/345 (38%)
Glyco_transf_64 663..900 CDD:370389 189/238 (79%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 421 1.000 Domainoid score I633
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H1103
Inparanoid 1 1.050 866 1.000 Inparanoid score I417
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D314330at33208
OrthoFinder 1 1.000 - - FOG0007209
OrthoInspector 1 1.000 - - oto103196
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X187
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
77.060

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