DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment botv and ext2

DIOPT Version :9

Sequence 1:NP_523790.1 Gene:botv / 37198 FlyBaseID:FBgn0027535 Length:972 Species:Drosophila melanogaster
Sequence 2:NP_001120887.1 Gene:ext2 / 100151709 XenbaseID:XB-GENE-867542 Length:718 Species:Xenopus tropicalis


Alignment Length:813 Identity:250/813 - (30%)
Similarity:379/813 - (46%) Gaps:199/813 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   191 LLPNT-LPRKSNPITGGMAASCEMHNCFNHSRCSLTSGF------PVYLYDPDEHSVQRKGYDID 248
            |||:: ||.:.:       .||.||.||:..||    ||      .||:|...:::.:..| .:.
 Frog    71 LLPDSPLPERGD-------LSCRMHTCFDVYRC----GFNPKNKVKVYIYPLKKYTDEYDG-SVG 123

  Fly   249 GFLKTTLKQTL---GYNAHIVKDPKHACIYLVLVGEALLEQDLLRNNRYAAQEAEHQQPSTPTLE 310
            |.:.....|.|   ..:....:|...||::|..:       |:|..|....:|.           
 Frog   124 GTISREYNQLLSAVSQSDFYTEDVSRACLFLPSI-------DVLNQNSLRIKET----------- 170

  Fly   311 NDCPVDMEKLYSLPYWGGDGRNHVLLNLARRDLTSHRTNPLYRQNTMRAIVVQSAFEREQFRPGY 375
                  .:.|..||.| ..|.||:|.|:.......:.|.....::  ||::....|....:|.||
 Frog   171 ------AQALAQLPRW-DRGSNHLLFNMLPGGPPDYNTALDVPRD--RALLAGGGFSTWTYRQGY 226

  Fly   376 DLIVPPILGPPGGDVWQECAEMVPA-RRKYLLTYQGELRPK-QSSLNPLDA------FILEHLAD 432
            |:.: |:......:|  ...|..|. |..:||:.|..|.|: :|.|..:.|      .|||..::
 Frog   227 DVSI-PVYSSLSAEV--NLPEKAPGPRAHFLLSSQTSLHPEFRSELEAIRAENGESVLILEKCSN 288

  Fly   433 MAKGATQDQFVLQFQCVPATEQQEGDSLPDWTLCGSDSSRRQLLKDSTFSLILPPLNGRVSSTLM 497
            ...||...:           ::...:.:.|:.         |:|::|||.::|  ...|:..:: 
 Frog   289 YTDGAAAHR-----------KRCYRNVVYDYP---------QILQESTFCIVL--RGARLGQSV- 330

  Fly   498 LARIYEALRSGAVPVILGADELRLPYAETVDWRRTALLLPKARITELHFLLRAVQDADLLLLRRQ 562
               :.:.|::|.||||: ||...||::|.:||:|.::::|:.::.|::.:|:||....|..::||
 Frog   331 ---LSDVLQAGCVPVII-ADSYVLPFSEVLDWKRASVVIPEEKMFEMYSILQAVPQRQLEEMQRQ 391

  Fly   563 GRLIWERYLSSVQATVDTVIASLRDRLGIPPRPVPSVIAQSVFNSTFIPLKSDPPVGLDTEPEES 627
            .|..||.|.||:::.....:..:.||:                                      
 Frog   392 ARWFWEGYFSSMKSIALATLQIINDRI-------------------------------------- 418

  Fly   628 LGPIEPPYPSPAFRRNYTILRMQAKEAWN-----DWL---DPFYLYPQLPFDPALPSEAKFMGSH 684
                   ||..|  |:|        |.||     .|.   :|.:|       |.:|         
 Frog   419 -------YPYAA--RSY--------EEWNGPPAVQWSSVNNPLFL-------PLIP--------- 450

  Fly   685 TGFRPIGKGLGGAGKEFGESLGGNYPREQ-FTIVMLTYEREQVLMDSLGRLYGLPYLHKVVVVWN 748
                                     |:.| ||.|:|||:|.:.|...:..:..:|.|.|::||||
 Frog   451 -------------------------PQSQGFTAVVLTYDRVESLFRVITEVSKVPSLSKLLVVWN 490

  Fly   749 SP-KPPLDDLRWPDIGVPVAVLRAPRNSLNNRFLPFDVIETEAVLSVDDD-AHLRHDEILFGFRV 811
            :. |.|.:...||.|.||:.|::...|.|:|||.|:..|||||||::||| ..|..||:.||:.|
 Frog   491 NQNKNPPEVSVWPKIRVPLKVVKTTENKLSNRFFPYSEIETEAVLAIDDDIIMLTSDELQFGYEV 555

  Fly   812 WREHRDRVVGFPGRYHAWDLGNPNGQWHYNSNYSCELSMVLTGAAFVHKYYLYLYTYHLPQAIRD 876
            |||..||:||:|||.|.||  :...:|.|.|.::.|:|||||||||.|||:.|||||.:|..|::
 Frog   556 WREFPDRLVGYPGRLHLWD--HEMSKWKYESEWTNEVSMVLTGAAFYHKYFNYLYTYKMPGDIKN 618

  Fly   877 KVDEYMNCEDIAMNFLVSHITRKPPVKVTSRWTFRCPGCPV--SLSEDDTHFQERHKCINFFSRV 939
            .||.:||||||||||||:::|.|.|:|||.|..|:||.|..  .||.|.||..||.:|||.|:.|
 Frog   619 WVDAHMNCEDIAMNFLVANVTGKAPIKVTPRKKFKCPECTAIDGLSLDQTHMVERSECINKFASV 683

  Fly   940 FGYTPLLNTQYRADSILFKTRIPHDKQKCFKYI 972
            ||..||...::|||.:|:|...| :|.|.|..|
 Frog   684 FGTMPLKVVEHRADPVLYKDDFP-EKLKSFPNI 715

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
botvNP_523790.1 TBPIP <107..185 CDD:284512
Exostosin 224..551 CDD:281069 77/343 (22%)
Glyco_transf_64 714..949 CDD:286358 122/238 (51%)
ext2NP_001120887.1 Exostosin 100..380 CDD:281069 75/337 (22%)
Glyco_transf_64 456..690 CDD:286358 121/235 (51%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D314330at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X187
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
33.010

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