| Sequence 1: | NP_001356890.1 | Gene: | 5-HT1A / 37196 | FlyBaseID: | FBgn0004168 | Length: | 846 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | XP_073798480.1 | Gene: | parietopsin / 796632 | ZFINID: | ZDB-GENE-101129-2 | Length: | 349 | Species: | Danio rerio |
| Alignment Length: | 253 | Identity: | 57/253 - (22%) |
|---|---|---|---|
| Similarity: | 98/253 - (38%) | Gaps: | 33/253 - (13%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 216 AEDDFTQLLRMAV-----TSVLLGLMIL---VTIIGNVFVIAAIILERNLQNVANYLVASLAVAD 272
Fly 273 LFVACLVMPLGAVYEISQGWILGPELCDIWTSCDVLCCTASILHLVAIAVDRYWAVTNIDYIHSR 337
Fly 338 TSNRVFMMIFCVWTAAVIVSLAPQFGWKDPDYLQRIEQQKCMVS------QDVSYQVFATCCTFY 396
Fly 397 VPLLVILALYWKIYQTARKRIHRRRPRPVDAAVNNN-QPDGG--AATDTKLHRLRLRL 451 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| 5-HT1A | NP_001356890.1 | 7tmA_5-HT1A_invertebrates | 227..>413 | CDD:320454 | 44/199 (22%) |
| TM helix 1 | 228..254 | CDD:320454 | 9/33 (27%) | ||
| TM helix 2 | 261..287 | CDD:320454 | 8/25 (32%) | ||
| TM helix 3 | 299..329 | CDD:320454 | 6/29 (21%) | ||
| TM helix 4 | 340..362 | CDD:320454 | 5/21 (24%) | ||
| TM helix 5 | 383..412 | CDD:320454 | 7/28 (25%) | ||
| 7tm_GPCRs | <743..816 | CDD:475119 | |||
| TM helix 6 | 750..772 | CDD:410628 | |||
| TM helix 7 | 784..809 | CDD:410628 | |||
| parietopsin | XP_073798480.1 | None | |||
| Blue background indicates that the domain is not in the aligned region. | |||||