Sequence 1: | NP_001356890.1 | Gene: | 5-HT1A / 37196 | FlyBaseID: | FBgn0004168 | Length: | 846 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_077371.1 | Gene: | Htr5b / 79247 | RGDID: | 62388 | Length: | 370 | Species: | Rattus norvegicus |
Alignment Length: | 641 | Identity: | 155/641 - (24%) |
---|---|---|---|
Similarity: | 215/641 - (33%) | Gaps: | 302/641 - (47%) |
- Green bases have known domain annotations that are detailed below.
Fly 183 NDSSLFGEMLANRSGQLDLINGTGGLNVTTSKVAEDDFTQLLRMAVTSVLLGLMILVTIIGNVFV 247
Fly 248 IAAIILERNLQNVANYLVASLAVADLFVACLVMPLGAVYEISQG--WILGPELCDIWTSCDVLCC 310
Fly 311 TASILHLVAIAVDRYWAVTNIDYIHSRTSNRV-FMMIFCVWTAAVIVSLAP-QFGWKDPDYLQRI 373
Fly 374 EQQKCMVSQDVSYQVFATCCTFYVPLLVILALYWKIYQTARKRIHRRRPRPVDAAVNNNQPDGGA 438
Fly 439 ATDTKLHRLRLRLGRFSTAKSKTGSAVGVSGPASGGRALGLVDGNSTNTVNTVEDTEFSSSNVDS 503
Fly 504 KSRAGVEAPSTSGNQIATVSHLVALAKQQGKSTAKSSAAVNGMAPSGRQEDDGQRPEHGEQEDRE 568
Fly 569 ELEDQDEQVGPQPTTATSAMTAAGTNESEDQCKANGVEVLEDPQLQQQLEQVQQLQKSVKSGGGG 633
Fly 634 GASTSNATTITSISALSPQTPTSQGVGIAAAAAGPMTAKTSTLTSCNQSHPLCGTANESPSTPEP 698
Fly 699 RSRQPTTPQQQPHQQAHQQQQQQQQLSSIANPMQKVNKRKETLEAKRERKAAKTLAIITGAFVVC 763
Fly 764 WLPFFVMALTMPLCAACQISDSVASLFLWLGYFNSTLNPVIYTIFSPEFRQAFKRI 819 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
5-HT1A | NP_001356890.1 | 7tmA_5-HT1A_invertebrates | 227..>413 | CDD:320454 | 91/189 (48%) |
TM helix 1 | 228..254 | CDD:320454 | 10/25 (40%) | ||
TM helix 2 | 261..287 | CDD:320454 | 15/25 (60%) | ||
TM helix 3 | 299..329 | CDD:320454 | 19/29 (66%) | ||
TM helix 4 | 340..362 | CDD:320454 | 7/23 (30%) | ||
TM helix 5 | 383..412 | CDD:320454 | 18/28 (64%) | ||
7tm_GPCRs | <743..816 | CDD:355774 | 33/72 (46%) | ||
TM helix 6 | 747..772 | CDD:341315 | 11/24 (46%) | ||
TM helix 7 | 784..809 | CDD:341315 | 14/24 (58%) | ||
Htr5b | NP_077371.1 | Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1..36 | 3/12 (25%) | |
7tm_1 | 69..351 | CDD:278431 | 133/565 (24%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR24247 |
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 3.010 |