Sequence 1: | NP_001356890.1 | Gene: | 5-HT1A / 37196 | FlyBaseID: | FBgn0004168 | Length: | 846 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001139158.1 | Gene: | htr1d / 556429 | ZFINID: | ZDB-GENE-090409-3 | Length: | 386 | Species: | Danio rerio |
Alignment Length: | 631 | Identity: | 173/631 - (27%) |
---|---|---|---|
Similarity: | 233/631 - (36%) | Gaps: | 255/631 - (40%) |
- Green bases have known domain annotations that are detailed below.
Fly 192 LANRSGQLDLINGTGGLNVTTSKVAEDDFTQLLRMAVTSVLLGLMILVTIIGNVFVIAAIILERN 256
Fly 257 LQNVANYLVASLAVADLFVACLVMPLGAVYEISQGWILGPELCDIWTSCDVLCCTASILHLVAIA 321
Fly 322 VDRYWAVTN-IDYIHSRTSNRVFMMIFCVWTAAVIVSLAPQFGWKDPDYLQRIEQQKCMVSQD-V 384
Fly 385 SYQVFATCCTFYVPLLVILALYWKIYQTARKRIHRRRPRPVDAAVNNNQPDGGAATDTKLHRLRL 449
Fly 450 RLGRFSTAKSKTGSAVGVSGPASGGRALGLVDGNSTNTVNTVEDTEFSSSNVDSKSRAGVEAPST 514
Fly 515 SGNQIATVSHLVALAKQQGKSTAKSSAAVNGMAPSGRQEDDGQRPEHGEQEDREELEDQDEQVGP 579
Fly 580 QPTTATSAMTAAGTNESEDQCKANGVEVLEDPQLQQQLEQVQQLQKSVKSGGGGGASTSNATTIT 644
Fly 645 SISALSPQTPTSQGVGIAAAAAGPMTAKTSTLTSCNQSHPLCGTANESPSTPEPRSRQPTTPQQQ 709
Fly 710 PHQQAHQQQQQQQQLSSIANPMQKVNKRKETLEAKRERKAAKTLAIITGAFVVCWLPFFVMALTM 774
Fly 775 PLCAACQISDSVASLFLWLGYFNSTLNPVIYTIFSPEFRQAFKRIL 820 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
5-HT1A | NP_001356890.1 | 7tmA_5-HT1A_invertebrates | 227..>413 | CDD:320454 | 84/187 (45%) |
TM helix 1 | 228..254 | CDD:320454 | 10/25 (40%) | ||
TM helix 2 | 261..287 | CDD:320454 | 14/25 (56%) | ||
TM helix 3 | 299..329 | CDD:320454 | 21/29 (72%) | ||
TM helix 4 | 340..362 | CDD:320454 | 9/21 (43%) | ||
TM helix 5 | 383..412 | CDD:320454 | 12/29 (41%) | ||
7tm_GPCRs | <743..816 | CDD:355774 | 41/72 (57%) | ||
TM helix 6 | 747..772 | CDD:341315 | 18/24 (75%) | ||
TM helix 7 | 784..809 | CDD:341315 | 13/24 (54%) | ||
htr1d | NP_001139158.1 | 7tm_1 | 52..365 | CDD:278431 | 148/562 (26%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D310620at33208 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 1 | 1.000 | - | - | X366 | |
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
4 | 3.920 |