Sequence 1: | NP_001356890.1 | Gene: | 5-HT1A / 37196 | FlyBaseID: | FBgn0004168 | Length: | 846 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001129719.1 | Gene: | or90h4 / 556415 | ZFINID: | ZDB-GENE-070806-23 | Length: | 315 | Species: | Danio rerio |
Alignment Length: | 275 | Identity: | 52/275 - (18%) |
---|---|---|---|
Similarity: | 109/275 - (39%) | Gaps: | 73/275 - (26%) |
- Green bases have known domain annotations that are detailed below.
Fly 208 LNVTTSKVAEDDFTQLLRMAVTSVLLGLMILVTIIGNVFVI---AAIILERNLQNVANYLVASLA 269
Fly 270 VADLFVACLVMPLGAVYEISQ-GWILGPELCDIWTSCDVLCCTASILHLVAIAVDRYWAVTNIDY 333
Fly 334 IHSR--TSNRVFMMIFCVWTAAVIVSLAPQFGWKDPDYLQRIEQQKCMVSQDVS-YQVFATCC-T 394
Fly 395 FYVP-------------------LLVILALYWKIYQTARKRIHRRRPRPVDAAVNNNQPDGGAAT 440
Fly 441 DTK----LHRLRLRL 451 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
5-HT1A | NP_001356890.1 | 7tmA_5-HT1A_invertebrates | 227..>413 | CDD:320454 | 39/212 (18%) |
TM helix 1 | 228..254 | CDD:320454 | 6/28 (21%) | ||
TM helix 2 | 261..287 | CDD:320454 | 5/25 (20%) | ||
TM helix 3 | 299..329 | CDD:320454 | 8/29 (28%) | ||
TM helix 4 | 340..362 | CDD:320454 | 5/21 (24%) | ||
TM helix 5 | 383..412 | CDD:320454 | 7/49 (14%) | ||
7tm_GPCRs | <743..816 | CDD:355774 | |||
TM helix 6 | 747..772 | CDD:341315 | |||
TM helix 7 | 784..809 | CDD:341315 | |||
or90h4 | NP_001129719.1 | 7tm_4 | 32..>161 | CDD:304433 | 31/151 (21%) |
7tm_1 | 42..288 | CDD:278431 | 43/240 (18%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR24247 |
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
1 | 1.100 |