Sequence 1: | NP_001356890.1 | Gene: | 5-HT1A / 37196 | FlyBaseID: | FBgn0004168 | Length: | 846 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_037280.1 | Gene: | Htr5a / 25689 | RGDID: | 2851 | Length: | 357 | Species: | Rattus norvegicus |
Alignment Length: | 630 | Identity: | 148/630 - (23%) |
---|---|---|---|
Similarity: | 213/630 - (33%) | Gaps: | 306/630 - (48%) |
- Green bases have known domain annotations that are detailed below.
Fly 194 NRSGQLDLINGTGGLNVTTSKVAEDDFTQLLRMAVTSVLLGLMILVTIIGNVFVIAAIILERNLQ 258
Fly 259 NVANYLVASLAVADLFVACLVMPLGAVYEIS-QGWILGPELCDIWTSCDVLCCTASILHLVAIAV 322
Fly 323 DRYWAVT-NIDY---IHSRTSNRVFMMIFCVWTAAVIVSLAP-QFGWKDPDYLQRIEQQKCMVSQ 382
Fly 383 DVSYQVFATCCTFYVPLLVILALYWKIYQTARKRIHRRRPRPVDAAVNNNQPDGGAATDTKLHRL 447
Fly 448 RLRLGRFSTAKSKTGSAVGVSGPASGGRALGLVDGNSTNTVNTVEDTEFSSSNVDSKSRAGVEAP 512
Fly 513 STSGNQIATVSHLVALAKQQGKSTAKSSAAVNGMAPSGRQEDDGQRPEHGEQEDREELEDQDEQV 577
Fly 578 GPQPTTATSAMTAAGTNESEDQCKANGVEVLEDPQLQQQLEQVQQLQKSVKSGGGGGASTSNATT 642
Fly 643 ITSISALSPQTPTSQGVGIAAAAAGPMTAKTSTLTSCNQSHPLCGTANESPSTPEPRSRQPTTPQ 707
Fly 708 QQPHQQAHQQQQQQQQLSSIANPMQKVNKRKETLEAKRERKAAKTLAIITGAFVVCWLPFFVMAL 772
Fly 773 TMPLCAACQISDSVASLFLWLGYFNSTLNPVIYTIFSPEFRQAFK 817 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
5-HT1A | NP_001356890.1 | 7tmA_5-HT1A_invertebrates | 227..>413 | CDD:320454 | 86/191 (45%) |
TM helix 1 | 228..254 | CDD:320454 | 9/25 (36%) | ||
TM helix 2 | 261..287 | CDD:320454 | 14/25 (56%) | ||
TM helix 3 | 299..329 | CDD:320454 | 19/29 (66%) | ||
TM helix 4 | 340..362 | CDD:320454 | 8/22 (36%) | ||
TM helix 5 | 383..412 | CDD:320454 | 16/28 (57%) | ||
7tm_GPCRs | <743..816 | CDD:355774 | 33/72 (46%) | ||
TM helix 6 | 747..772 | CDD:341315 | 12/24 (50%) | ||
TM helix 7 | 784..809 | CDD:341315 | 14/24 (58%) | ||
Htr5a | NP_037280.1 | 7tm_GPCRs | 41..349 | CDD:421689 | 135/595 (23%) |
TM helix 1 | 42..68 | CDD:410628 | 9/26 (35%) | ||
TM helix 2 | 75..101 | CDD:410628 | 14/25 (56%) | ||
TM helix 3 | 114..144 | CDD:410628 | 19/29 (66%) | ||
TM helix 4 | 156..177 | CDD:410628 | 9/23 (39%) | ||
TM helix 5 | 197..226 | CDD:410628 | 16/28 (57%) | ||
TM helix 6 | 278..308 | CDD:410628 | 14/29 (48%) | ||
TM helix 7 | 317..342 | CDD:410628 | 14/24 (58%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR24247 |
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 3.010 |