| Sequence 1: | NP_001356890.1 | Gene: | 5-HT1A / 37196 | FlyBaseID: | FBgn0004168 | Length: | 846 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_492273.2 | Gene: | ser-5 / 184572 | WormBaseID: | WBGene00008890 | Length: | 454 | Species: | Caenorhabditis elegans |
| Alignment Length: | 239 | Identity: | 50/239 - (20%) |
|---|---|---|---|
| Similarity: | 84/239 - (35%) | Gaps: | 71/239 - (29%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 1166 IQHDVLVDALYVSNAFAARYLNGLDV-VRLQENVETYLNDDYMLSGRHVLDTLHIDGSVEIGTLN 1229
Fly 1230 GVDLTQFLNNVIWLDRPNAVQSALHFLHPLHVD-GDVSVDGALNEIPFVSFLRNVVYRTDGAAVE 1293
Fly 1294 FTGSKLFTQGFDVVGDLHTPTINN-VPVKDLVLKNESITFPGRVLTTGRVYV----KEMIVSGTI 1353
Fly 1354 NGKSFKPIE--AYY--AYDNATDTHIIKGDLRLQGQQTIHSLEA 1393 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| 5-HT1A | NP_001356890.1 | 7tmA_5-HT1A_invertebrates | 227..>413 | CDD:320454 | |
| TM helix 1 | 228..254 | CDD:320454 | |||
| TM helix 2 | 261..287 | CDD:320454 | |||
| TM helix 3 | 299..329 | CDD:320454 | |||
| TM helix 4 | 340..362 | CDD:320454 | |||
| TM helix 5 | 383..412 | CDD:320454 | |||
| 7tm_GPCRs | <743..816 | CDD:475119 | |||
| TM helix 6 | 750..772 | CDD:410628 | |||
| TM helix 7 | 784..809 | CDD:410628 | |||
| ser-5 | NP_492273.2 | 7tmA_amine_R-like | 64..365 | CDD:320098 | 35/159 (22%) |
| TM helix 1 | 64..88 | CDD:320098 | 9/33 (27%) | ||
| TM helix 2 | 95..122 | CDD:320098 | 7/35 (20%) | ||
| TM helix 3 | 133..163 | CDD:320098 | 8/29 (28%) | ||
| TM helix 4 | 175..195 | CDD:320098 | 4/7 (57%) | ||
| TM helix 5 | 214..294 | CDD:320098 | |||
| TM helix 6 | 295..325 | CDD:320098 | |||
| TM helix 7 | 334..359 | CDD:320098 | |||
| Blue background indicates that the domain is not in the aligned region. | |||||