Sequence 1: | NP_001356890.1 | Gene: | 5-HT1A / 37196 | FlyBaseID: | FBgn0004168 | Length: | 846 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001024339.1 | Gene: | ser-2 / 182110 | WormBaseID: | WBGene00004777 | Length: | 455 | Species: | Caenorhabditis elegans |
Alignment Length: | 633 | Identity: | 155/633 - (24%) |
---|---|---|---|
Similarity: | 248/633 - (39%) | Gaps: | 231/633 - (36%) |
- Green bases have known domain annotations that are detailed below.
Fly 201 LINGTGGLNVTTSKVAEDDFTQLLRMAV---TSVLLG-----LMILVTIIGNVFVIAAIILERNL 257
Fly 258 QNVANYLVASLAVADLFVACLVMPLGAVYEISQG-WILGPELCDIWTSCDVLCCTASILHLVAIA 321
Fly 322 VDRYWAVTN-IDYIHSRTSNRVFMMIFCVWTAAVIVSLAPQFGWKDPDYLQRIEQQKCMVSQDVS 385
Fly 386 YQVFATCCTFYVPLLVILALYWKIYQTARKRIHRRRPRPVDAAVNNNQPDGGAATDTKLHRLRLR 450
Fly 451 LGRFSTAKSKTGSAVGVSGPASGGRALGLVDGNSTNTVNTVEDTEFSSSNVDSKSRAGVEAPSTS 515
Fly 516 GNQI---ATVSHLVALAKQQGKSTAKSSAAVNGMAPSGRQEDDGQRPEHGEQEDREELEDQDEQV 577
Fly 578 GPQPTTATSAMTAAGTNESEDQCKANGVEVLEDPQLQQQLEQVQQLQKSVKSGGGGGASTSNATT 642
Fly 643 ITSISALSPQTPTSQGVGIAAAAAGPMTAKTSTLTSCNQSHPLCGTANESPSTPEPRSRQPTTPQ 707
Fly 708 QQPHQQAHQQQQQQQQLSSIANPMQKVNKRKETLEAKRERKAAKTLAIITGAFVVCWLPFFVMAL 772
Fly 773 TMPLCAACQISDSVASLFLWLGYFNSTLNPVIYTIFSPEFRQAFKRIL 820 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
5-HT1A | NP_001356890.1 | 7tmA_5-HT1A_invertebrates | 227..>413 | CDD:320454 | 72/195 (37%) |
TM helix 1 | 228..254 | CDD:320454 | 8/33 (24%) | ||
TM helix 2 | 261..287 | CDD:320454 | 14/25 (56%) | ||
TM helix 3 | 299..329 | CDD:320454 | 18/29 (62%) | ||
TM helix 4 | 340..362 | CDD:320454 | 6/21 (29%) | ||
TM helix 5 | 383..412 | CDD:320454 | 10/28 (36%) | ||
7tm_GPCRs | <743..816 | CDD:355774 | 34/72 (47%) | ||
TM helix 6 | 747..772 | CDD:341315 | 14/24 (58%) | ||
TM helix 7 | 784..809 | CDD:341315 | 13/24 (54%) | ||
ser-2 | NP_001024339.1 | 7tm_1 | 74..423 | CDD:278431 | 136/566 (24%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0002041 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 1 | 0.900 | - | - | OOG6_104614 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 1 | 1.000 | - | - | X366 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
4 | 3.810 |