DRSC/TRiP Functional Genomics Resources

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Protein Alignment 5-HT1A and DRD2

DIOPT Version :10

Sequence 1:NP_001356890.1 Gene:5-HT1A / 37196 FlyBaseID:FBgn0004168 Length:846 Species:Drosophila melanogaster
Sequence 2:NP_000786.1 Gene:DRD2 / 1813 HGNCID:3023 Length:443 Species:Homo sapiens


Alignment Length:598 Identity:159/598 - (26%)
Similarity:240/598 - (40%) Gaps:201/598 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   230 SVLLGLMILVTIIGNVFVIAAIILERNLQNVANYLVASLAVADLFVACLVMPLGAVYEISQGWIL 294
            :.||.|:|.|.:.|||.|..|:..|:.||...|||:.|||||||.||.||||.....|:...|..
Human    38 ATLLTLLIAVIVFGNVLVCMAVSREKALQTTTNYLIVSLAVADLLVATLVMPWVVYLEVVGEWKF 102

  Fly   295 GPELCDIWTSCDVLCCTASILHLVAIAVDRYWAVTNIDYIHSRTSN--RVFMMIFCVWTAAVIVS 357
            ....|||:.:.||:.||||||:|.||::|||.||......::|.|:  ||.:||..||..:..:|
Human   103 SRIHCDIFVTLDVMMCTASILNLCAISIDRYTAVAMPMLYNTRYSSKRRVTVMISIVWVLSFTIS 167

  Fly   358 LAPQFGWKDPDYLQRIEQQKCMVSQDVSYQVFATCCTFYVPLLVILALYWKIYQTARKRIHRRRP 422
            ....||      |...:|.:|::: :.::.|:::..:||||.:|.|.:|.|||...|    |||.
Human   168 CPLLFG------LNNADQNECIIA-NPAFVVYSSIVSFYVPFIVTLLVYIKIYIVLR----RRRK 221

  Fly   423 RPVDAAVNNNQPDGGAATDTKLHRLRLRLGRFSTAKSKTGSAVGVSGPASGGRALGLVDGNSTNT 487
            |     ||..:       .::..|..||                  .|         :.||.|:.
Human   222 R-----VNTKR-------SSRAFRAHLR------------------AP---------LKGNCTHP 247

  Fly   488 VNTVEDTEFSSSNVDSKSRAGVEAPSTSGNQIATVSHLVALAKQQGKSTAKSSAAVNGMAPSGRQ 552
                ||.:..:  |..||                                      ||..|..|:
Human   248 ----EDMKLCT--VIMKS--------------------------------------NGSFPVNRR 268

  Fly   553 EDDGQRPEHGEQEDREELEDQDEQVGPQPTTATSAMTAAGTNESEDQCKANGVEVLEDPQLQQQL 617
            ..:..|                                                           
Human   269 RVEAAR----------------------------------------------------------- 274

  Fly   618 EQVQQLQKSVKSGGGGGASTSNATTITSISALSPQTPTSQGVGIAAAAAGPMTAKTSTLTSCNQS 682
             :.|:|:..:                  :|:.||...|..         .|:......||..:.|
Human   275 -RAQELEMEM------------------LSSTSPPERTRY---------SPIPPSHHQLTLPDPS 311

  Fly   683 HPLCGTANESPSTPEPRSRQPTTPQQQPHQQAHQQQQQQQQLSSIAN-----PMQKVNKRKETLE 742
            |      :...|||:    .|..|::..|.:.|.:..:..::.::.|     .::.:::||  |.
Human   312 H------HGLHSTPD----SPAKPEKNGHAKDHPKIAKIFEIQTMPNGKTRTSLKTMSRRK--LS 364

  Fly   743 AKRERKAAKTLAIITGAFVVCWLPFFVMALTMPLCAACQISDSVASLFLWLGYFNSTLNPVIYTI 807
            .::|:||.:.|||:.|.|::||||||:..:....| .|.|...:.|.|.||||.||.:||:|||.
Human   365 QQKEKKATQMLAIVLGVFIICWLPFFITHILNIHC-DCNIPPVLYSAFTWLGYVNSAVNPIIYTT 428

  Fly   808 FSPEFRQAFKRIL 820
            |:.|||:||.:||
Human   429 FNIEFRKAFLKIL 441

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
5-HT1ANP_001356890.1 7tmA_5-HT1A_invertebrates 227..>413 CDD:320454 75/184 (41%)
TM helix 1 228..254 CDD:320454 10/23 (43%)
TM helix 2 261..287 CDD:320454 16/25 (64%)
TM helix 3 299..329 CDD:320454 18/29 (62%)
TM helix 4 340..362 CDD:320454 7/23 (30%)
TM helix 5 383..412 CDD:320454 11/28 (39%)
7tm_GPCRs <743..816 CDD:475119 34/72 (47%)
TM helix 6 750..772 CDD:410628 11/21 (52%)
TM helix 7 784..809 CDD:410628 13/24 (54%)
DRD2NP_000786.1 7tmA_D2_dopamine_R 35..437 CDD:320435 155/592 (26%)
TM helix 1 36..62 CDD:320435 10/23 (43%)
TM helix 2 69..92 CDD:320435 16/22 (73%)
TM helix 3 107..137 CDD:320435 18/29 (62%)
TM helix 4 152..170 CDD:320435 6/17 (35%)
TM helix 5 186..211 CDD:320435 8/24 (33%)
Interaction with PPP1R9B. /evidence=ECO:0000250 211..373 52/347 (15%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 281..332 15/87 (17%)
TM helix 6 366..396 CDD:320435 14/29 (48%)
TM helix 7 405..430 CDD:320435 13/24 (54%)

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