Sequence 1: | NP_001356890.1 | Gene: | 5-HT1A / 37196 | FlyBaseID: | FBgn0004168 | Length: | 846 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_006535694.1 | Gene: | Htr5a / 15563 | MGIID: | 96283 | Length: | 380 | Species: | Mus musculus |
Alignment Length: | 602 | Identity: | 143/602 - (23%) |
---|---|---|---|
Similarity: | 204/602 - (33%) | Gaps: | 290/602 - (48%) |
- Green bases have known domain annotations that are detailed below.
Fly 220 FTQLLRMAVTSVLLGLMILVTIIGNVFVIAAIILERNLQNVANYLVASLAVADLFVACLVMPLGA 284
Fly 285 VYEIS-QGWILGPELCDIWTSCDVLCCTASILHLVAIAVDRYWAVT-NIDYIHSRTSNRVF-MMI 346
Fly 347 FCVWTAAVIVSLAP-QFGWKDPDYLQRIEQQKCMVSQDVSYQVFATCCTFYVPLLVILALYWKIY 410
Fly 411 QTARKRIHRRRPRPVDAAVNNNQPDGGAATDTKLHRLRLRLGRFSTAKSKTGSAVGVSGPASGGR 475
Fly 476 ALGLVDGNSTNTVNTVEDTEFSSSNVDSKSRAGVEAPSTSGNQIATVSHLVALAKQQGKSTAKSS 540
Fly 541 AAVNGMAPSGRQEDDGQRPEHGEQEDREELEDQDEQVGPQPTTATSAMTAAGTNESEDQCKANGV 605
Fly 606 EVLEDPQLQQQLEQVQQLQKSVKSGGGGGASTSNATTITSISALSPQTPTSQGVGIAAAAAGPMT 670
Fly 671 AKTSTLTSCNQSHPLCGTANESPSTPEPRSRQPTTPQQQPHQQAHQQQQQQQQLSSIANPMQKVN 735
Fly 736 KRKETLEAKRERKAAKTLAIITGAFVVCWLPFFVMALTMPLCAACQISDSVASLFLWLGYFNSTL 800
Fly 801 NPVIYTIFSPEFRQAFK 817 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
5-HT1A | NP_001356890.1 | 7tmA_5-HT1A_invertebrates | 227..>413 | CDD:320454 | 87/189 (46%) |
TM helix 1 | 228..254 | CDD:320454 | 9/25 (36%) | ||
TM helix 2 | 261..287 | CDD:320454 | 14/25 (56%) | ||
TM helix 3 | 299..329 | CDD:320454 | 19/29 (66%) | ||
TM helix 4 | 340..362 | CDD:320454 | 9/23 (39%) | ||
TM helix 5 | 383..412 | CDD:320454 | 16/28 (57%) | ||
7tm_GPCRs | <743..816 | CDD:355774 | 32/72 (44%) | ||
TM helix 6 | 747..772 | CDD:341315 | 12/24 (50%) | ||
TM helix 7 | 784..809 | CDD:341315 | 14/24 (58%) | ||
Htr5a | XP_006535694.1 | 7tmA_5-HT5 | 64..372 | CDD:320451 | 138/593 (23%) |
TM helix 1 | 66..90 | CDD:320451 | 9/24 (38%) | ||
TM helix 2 | 99..121 | CDD:320451 | 13/21 (62%) | ||
TM helix 3 | 138..160 | CDD:320451 | 13/21 (62%) | ||
TM helix 4 | 183..199 | CDD:320451 | 5/15 (33%) | ||
TM helix 5 | 221..244 | CDD:320451 | 11/22 (50%) | ||
TM helix 6 | 304..329 | CDD:320451 | 12/24 (50%) | ||
TM helix 7 | 340..365 | CDD:320451 | 14/24 (58%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR24247 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 3.010 |