DRSC/TRiP Functional Genomics Resources

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Protein Alignment 5-HT1A and ADRA1D

DIOPT Version :10

Sequence 1:NP_001356890.1 Gene:5-HT1A / 37196 FlyBaseID:FBgn0004168 Length:846 Species:Drosophila melanogaster
Sequence 2:NP_000669.1 Gene:ADRA1D / 146 HGNCID:280 Length:572 Species:Homo sapiens


Alignment Length:704 Identity:156/704 - (22%)
Similarity:229/704 - (32%) Gaps:316/704 - (44%)


- Green bases have known domain annotations that are detailed below.


  Fly   145 SSPASSPALQLIDMDNNYTNVAVGLGAMLLNDTLLLEGNDSSLFGEMLANRSGQLDLINGT---G 206
            ::|:..||:..:..........||.|:.        |.|.||......|...|.   :|||   |
Human    35 AAPSEGPAVGGVPGGAGGGGGVVGAGSG--------EDNRSSAGEPGSAGAGGD---VNGTAAVG 88

  Fly   207 GLNVTTSKVAEDDFTQLLRMAVTSVLLGLMILVTIIGNVFVIAAIILERNLQNVANYLVASLAVA 271
            ||.|:...|.            ..|.|...||:.:.||:.||.::...|:||.|.||.:.:||||
Human    89 GLVVSAQGVG------------VGVFLAAFILMAVAGNLLVILSVACNRHLQTVTNYFIVNLAVA 141

  Fly   272 DLFVACLVMPLGAVYEISQGWILGPELCDIWTSCDVLCCTASILHLVAIAVDRYWAVT-NIDYIH 335
            ||.::..|:|..|..|:...|..|...||:|.:.||||||||||.|..|:||||..|. ::.|..
Human   142 DLLLSATVLPFSATMEVLGFWAFGRAFCDVWAAVDVLCCTASILSLCTISVDRYVGVRHSLKYPA 206

  Fly   336 SRTSNRVFMMIFCVWTAAVIVSLAPQFGWKDPDYLQRIEQQKCMVSQDVSYQVFATCCTFYVPLL 400
            ..|..:...::..:|..|::||:.|..|||:|   ...:::.|.::::..|.||::.|:||:|:.
Human   207 IMTERKAAAILALLWVVALVVSVGPLLGWKEP---VPPDERFCGITEEAGYAVFSSVCSFYLPMA 268

  Fly   401 VILALYWKIYQTARKRIHRRRPRPVDAAVNNNQPDGGAATDTKLHRLRLRLGRFSTAKSKTGSAV 465
            ||:.:|.::|..||.     ..|.::|.|...:   |.|::..| |:..|           |:|.
Human   269 VIVVMYCRVYVVARS-----TTRSLEAGVKRER---GKASEVVL-RIHCR-----------GAAT 313

  Fly   466 GVSGPASGGRALGLVDGNSTNTVNTVEDTEFSSSNVDSKSRAGVEAPSTSGNQIATVSHLVALAK 530
            |..| |.|.|                                     |..|:             
Human   314 GADG-AHGMR-------------------------------------SAKGH------------- 327

  Fly   531 QQGKSTAKSSAAVNGMAPSGRQEDDGQRPEHGEQEDREELEDQDEQVGPQPTTATSAMTAAGTNE 595
                 |.:||.:|                                                    
Human   328 -----TFRSSLSV---------------------------------------------------- 335

  Fly   596 SEDQCKANGVEVLEDPQLQQQLEQVQQLQKSVKSGGGGGASTSNATTITSISALSPQTPTSQGVG 660
                                                                             
Human   336 ----------------------------------------------------------------- 335

  Fly   661 IAAAAAGPMTAKTSTLTSCNQSHPLCGTANESPSTPEPRSRQPTTPQQQPHQQAHQQQQQQQQLS 725
                                                                             
Human   336 ----------------------------------------------------------------- 335

  Fly   726 SIANPMQKVNKRKETLEAKRERKAAKTLAIITGAFVVCWLPFFVMALTMPLCAACQISDSVASLF 790
                         ..|:..||:||||||||:.|.||:||.|||.:.....|....:.|:.|..:.
Human   336 -------------RLLKFSREKKAAKTLAIVVGVFVLCWFPFFFVLPLGSLFPQLKPSEGVFKVI 387

  Fly   791 LWLGYFNSTLNPVIYTIFSPEFRQAFKRILFGGHRPVHYRSGKLXIVHAKRRRR 844
            .|||||||.:||:||...|.||::||.|:|               ....:||||
Human   388 FWLGYFNSCVNPLIYPCSSREFKRAFLRLL---------------RCQCRRRRR 426

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
5-HT1ANP_001356890.1 7tmA_5-HT1A_invertebrates 227..>413 CDD:320454 69/186 (37%)
TM helix 1 228..254 CDD:320454 8/25 (32%)
TM helix 2 261..287 CDD:320454 11/25 (44%)
TM helix 3 299..329 CDD:320454 19/29 (66%)
TM helix 4 340..362 CDD:320454 5/21 (24%)
TM helix 5 383..412 CDD:320454 11/28 (39%)
7tm_GPCRs <743..816 CDD:475119 35/72 (49%)
TM helix 6 750..772 CDD:410628 14/21 (67%)
TM helix 7 784..809 CDD:410628 12/24 (50%)
ADRA1DNP_000669.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..77 11/49 (22%)
7tmA_alpha1D_AR 97..413 CDD:320450 129/601 (21%)
TM helix 1 98..124 CDD:320450 8/37 (22%)
TM helix 2 131..157 CDD:320450 11/25 (44%)
TM helix 3 169..199 CDD:320450 19/29 (66%)
TM helix 4 211..234 CDD:320450 5/22 (23%)
TM helix 5 251..280 CDD:320450 11/28 (39%)
TM helix 6 341..371 CDD:320450 18/29 (62%)
TM helix 7 381..406 CDD:320450 12/24 (50%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 444..488
Blue background indicates that the domain is not in the aligned region.

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