| Sequence 1: | NP_001356890.1 | Gene: | 5-HT1A / 37196 | FlyBaseID: | FBgn0004168 | Length: | 846 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | XP_017211912.1 | Gene: | or90b2 / 100150771 | ZFINID: | ZDB-GENE-070806-24 | Length: | 349 | Species: | Danio rerio |
| Alignment Length: | 150 | Identity: | 34/150 - (22%) |
|---|---|---|---|
| Similarity: | 61/150 - (40%) | Gaps: | 19/150 - (12%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 218 DDFTQLLRMAVTSVLLGLMILVTIIGNVFVIAAIILERNLQNVANY-LVASLAVADLFVACLVMP 281
Fly 282 LGAVYEISQGWILGPELCDIWTSCDVLCCTASILH------LVAIAVDRYWAVTN-IDYIHSRTS 339
Fly 340 NRVFMMIFCVWTAAVIVSLA 359 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| 5-HT1A | NP_001356890.1 | 7tmA_5-HT1A_invertebrates | 227..>413 | CDD:320454 | 32/140 (23%) |
| TM helix 1 | 228..254 | CDD:320454 | 9/25 (36%) | ||
| TM helix 2 | 261..287 | CDD:320454 | 4/26 (15%) | ||
| TM helix 3 | 299..329 | CDD:320454 | 9/35 (26%) | ||
| TM helix 4 | 340..362 | CDD:320454 | 6/19 (32%) | ||
| TM helix 5 | 383..412 | CDD:320454 | |||
| 7tm_GPCRs | <743..816 | CDD:475119 | |||
| TM helix 6 | 750..772 | CDD:410628 | |||
| TM helix 7 | 784..809 | CDD:410628 | |||
| or90b2 | XP_017211912.1 | 7tm_classA_rhodopsin-like | 64..>251 | CDD:410626 | 31/136 (23%) |
| TM helix 1 | 64..84 | CDD:410626 | 8/22 (36%) | ||
| TM helix 2 | 92..118 | CDD:410626 | 4/28 (14%) | ||
| TM helix 3 | 125..158 | CDD:410626 | 9/37 (24%) | ||
| TM helix 4 | 171..190 | CDD:410626 | 6/18 (33%) | ||
| TM helix 5 | 215..244 | CDD:410626 | |||
| Blue background indicates that the domain is not in the aligned region. | |||||